Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADQ5
Confidence97.94%DateThu Jan 5 11:21:33 GMT 2012
Rank2Aligned Residues49
% Identity20%Templatec1q5vB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:nickel responsive regulator; PDBTitle: apo-nikr
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20..... ....30.........40.........
Predicted Secondary structure 








.






Query SS confidence 
























.























Query Sequence  MNTVFLHLSEEAIKRLNKLRGWRKV. SRSAILREAVEQYLERQQFPVRKA
Query Conservation 
 

 
 
 

 
  

 

     .






 

  

          
Alig confidence 
























.























Template Conservation 
 






  

  

  
   

 



 





  
 
        
Template Sequence  MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT
Template Known Secondary structure 








T

STT




TT
Template Predicted Secondary structure 










Template SS confidence 

















































   1........10.........20.........30.........40.........50
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions