 |
Job Description | P25397 | Confidence | 99.46% | Date | Thu Jan 5 11:41:47 GMT 2012 |
Rank | 180 | Aligned Residues | 134 |
% Identity | 16% | Template | d2b78a2 |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| hypothetical RNA methyltransferase
|
Resolution | 2.00 |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
. | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
Query Sequence |   |
I | R | D | E | N | Y | F | T | D | K | Y | E | L | T | R | T | H | S | E | V | L | E | A | V | K | V | V | K | P | G | K | T | L | D | L | G | C | G | N | G | R | N | S | L | Y | L | A | A | N | G | . |
Y | D | V | D | A | W | D | K | N | A | M | S | I | A | N | V | E | R | I | K | S | I | E | N | L | . |
. |
D | N |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|
|   |   |
| . |   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | F | L | N | D | G | L | M | T | G | I | F | L | D | Q | R | Q | V | R | N | E | L | I | N | G | S | A | A | G | K | T | V | L | N | L | F | S | Y | T | A | A | F | S | V | A | A | A | M | G | G | A | M | A | T | T | S | V | D | L | A | K | R | S | R | A | L | S | L | A | H | F | E | A | N | H | L | D | M | A | N |
Template Known Secondary structure |   |
 |
| S | S | S | S | S |
|
| S | S |
| G | G | G |  |  |  |  |  |  |  |  |  | T | T | T | B | T |
|  |  |  |  |  | T |
| T | T | T |  |  |  |  |  |  |  |  | T | T | B | S |  |  |  |  |  |  | S |
| T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| T | T |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
90 | . | . | . | . | . | . | . | . | . | 100 | |
|
|
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  | . | . | . | . |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | H | T | R | V | V | D | L | N | N | . |
. |
. |
. |
. |
L | T | F | D | R | Q | Y | D | F | I | L | . |
. |
. |
. |
S | T | V | V | L | M | F | L | E | A | K | T | I | P | G | L | I | A | N | M | Q | R | C | T | K | P | G | G | Y | N | L | I | V | A | A | M | D | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|   | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|
|   |
|   |   |   |   |   |   | . | . |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |
|
|
|   |   |
Template Sequence |   |
H | Q | L | V | V | M | D | V | F | D | Y | F | K | Y | A | R | R | H | H | L | T | Y | D | I | I | I | I | D | P | P | S | F | E | V | F | S | V | S | . |
. |
K | D | Y | H | K | L | I | R | Q | G | L | E | I | L | S | E | N | G | L | I | I | A | S | T | N | A | A | N |
Template Known Secondary structure |   |
 |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
265 | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | |
|
. | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|