 |
Job Description | P25397 | Confidence | 99.40% | Date | Thu Jan 5 11:41:47 GMT 2012 |
Rank | 196 | Aligned Residues | 125 |
% Identity | 14% | Template | d2as0a2 |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| hypothetical RNA methyltransferase
|
Resolution | 1.80 |
|
 |
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
. | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
F | T | D | K | Y | E | L | T | R | T | H | S | E | V | L | E | A | V | K | V | V | K | P | G | K | T | L | D | L | G | C | G | N | G | R | N | S | L | Y | L | A | A | N | G | . |
Y | D | V | D | A | W | D | K | N | A | M | S | I | A | N | V | E | R | I | K | S | I | E | N | L | D | N | L | . |
H | T | R | V | V | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|
|   |   |
| . |   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
Q | K | T | G | F | F | L | D | Q | R | E | N | R | L | A | L | E | K | W | V | Q | P | G | D | R | V | L | D | V | F | T | Y | T | G | G | F | A | I | H | A | A | I | A | G | A | D | E | V | I | G | I | D | K | S | P | R | A | I | E | T | A | K | E | N | A | K | L | N | G | V | E | D | R | X | K | F | I | V | G | S |
Template Known Secondary structure |   |
S | S | S |
|
|
| S | T | T |  |  |  |  |  |  |  | G | G | G |
|
| T | T |
|  |  |  |  | T | T |
| T | T | T |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
196 | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . |
  |
  |   |
87 | . | . | |
|
|
|
|
90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | N | . |
. |
. |
. |
. |
L | T | F | D | R | Q | Y | D | F | I | L | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
T | V | V | L | M | F | L | E | A | K | T | I | P | G | L | I | A | N | M | Q | R | C | T | K | P | G | G | Y | N | L | I | V | A | A |
Query Conservation |   |
  |   |   | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|   |   | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |
|   |
|   |   |   |
Alig confidence |   |
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |
|
|
|   |
|   |   |   |
|
|
Template Sequence |   |
A | F | E | E | X | E | K | L | Q | K | K | G | E | K | F | D | I | V | V | L | D | P | P | A | F | V | Q | H | E | K | D | L | K | A | G | L | . |
. |
R | A | Y | F | N | V | N | F | A | G | L | N | L | V | K | D | G | G | I | L | V | T | C | S | C |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |
|
|
|
| S |
| S | S | G | G | G |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
276 | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | |
|
. | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|