Return to main results Retrieve Phyre Job Id

Job DescriptionP25397
Confidence99.89%DateThu Jan 5 11:41:47 GMT 2012
Rank11Aligned Residues127
% Identity17%Templatec3ofkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:nodulation protein s; PDBTitle: crystal structure of n-methyltransferase nods from bradyrhizobium2 japonicum wm9 in complex with s-adenosyl-l-homocysteine (sah)
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  ENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVV
Query Conservation                  
   
       






 
     

  
  
   
 
   
                    
Alig confidence 






































































..






Template Conservation 
               
   
      







 
     

     
  

 
   
  
        ..       
Template Sequence  WRLDDNPFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWS. . HISWAAT
Template Known Secondary structure  GGTTT
TTTSS

TTSGGGS
TTT
S..S
Template Predicted Secondary structure 


























..






Template SS confidence 















































































   20.........30.........40.........50.........60.........70.........80.........90 .......
 
   86...90.........100........ .110.........120.........130....
Predicted Secondary structure 


















.



Query SS confidence 






















.

























Query Sequence  DLNNLTFDRQYDFILSTVVLMFL. EAKTIPGLIANMQRCTKPGGYNLIVA
Query Conservation             
 
     
   .        
    
 




 
 
  
Alig confidence 






















.

























Template Conservation             
 
     
            
      




 
    
Template Sequence  DILQFSTAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS
Template Known Secondary structure 
TTT


S

S
GGGSSST
Template Predicted Secondary structure 
















Template SS confidence 

















































   98.100.........110.........120.........130.........140.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions