Job Description P25397 Confidence 99.65% Date Thu Jan 5 11:41:47 GMT 2012 Rank 138 Aligned Residues 156 % Identity 15% Template c3id5F_ PDB info PDB header:transferase/ribosomal protein/rna Chain: F: PDB Molecule:fibrillarin-like rrna/trna 2'-o-methyltransferase; PDBTitle: crystal structure of sulfolobus solfataricus c/d rnp assembled with2 nop5, fibrillarin, l7ae and a split half c/d rna Resolution 4.01 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		L	E	A	V	K	V	V	K	P	G	K	T	L	D	L	G	C	G	N	G	R	N	S	L	Y	L	A	A	.	.	.	N	G	Y	D	V	D	A	W	D	K	N	A	M	S	I	A	N	V	E	R	I	K	S	I	E	N	L	D	N	L	H	T	R	V	V	D	L	N	N	L	T	F	D	R	Q	Y	D	F	I
Query Conservation																														.	.	.
Alig confidence																														.	.	.																										.	.
Template Conservation																																																										.	.
Template Sequence		L	K	T	N	P	I	R	K	G	T	K	V	L	Y	L	G	A	A	S	G	T	T	I	S	H	V	S	D	I	I	E	L	N	G	K	A	Y	G	V	E	F	S	P	R	V	V	R	E	L	L	L	V	A	Q	R	R	.	.	P	N	I	F	P	L	L	A	D	A	R	F	P	Q	S	Y	K	S	V	V	E	N
Template Known Secondary structure			S						T	T							T		T	T	S												T	T	S																							.	.	T	T								T	T		G	G	G	T	T	T	T
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	T	V	V	L	M	F	L	E	A	K	T	I	P	G	L	I	A	N	M	Q	R	C	T	K	P	G	G	Y	N	L	I	V	A	A	M	D	T	A	D	Y	P	C	T	V	G	F	P	F	A	F	K	E	G	E	L	R	R	Y	Y	E	G	W	E	R	V	K	Y	N	E	D	V	G	E	L	H	R	T	D
Query Conservation
Alig confidence																																															.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Sequence		V	D	V	L	Y	V	D	I	A	Q	P	D	Q	T	D	I	A	I	Y	N	A	K	F	F	L	K	V	N	G	D	M	L	L	V	I	K	A	V	T	K	D	P	K	E	I	.	.	.	.	.	.	Y	K	T	E	V	E	K	L	E	N	S	N	F	E	T	I	Q	I	I	N	L	.	.	.	.	.	.	.	.
Template Known Secondary structure										S		T	T																													S	S	S	S	S	.	.	.	.	.	.	T	T								T	T	T										.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.							.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	G	N	R	I	K	L	R	F	A	T	M	L	A	R	K	K
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	D	P	Y	D	K	D	H	A	I	V	L	S	K	Y	K
Template Known Secondary structure		.	.	.	T	T	T	S	S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					217	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions