Return to main results Retrieve Phyre Job Id

Job DescriptionP25397
Confidence99.90%DateThu Jan 5 11:41:47 GMT 2012
Rank9Aligned Residues174
% Identity16%Templatec3h2bB_
PDB info PDB header:transferaseChain: B: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of the sam-dependent methyltransferase2 cg3271 from corynebacterium glutamicum in complex with s-3 adenosyl-l-homocysteine and pyrophosphate. northeast4 structural genomics consortium target cgr113a
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  ENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVV
Query Conservation                  
   
       






 
     

  
  
   
 
   
                    
Alig confidence 








































































....


Template Conservation                              






 
     
      
 


 
   
  

         ....   
Template Sequence  EALLGTVISAEDPDRVLIEPWATGVDGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTHPSVTFH. . . . HGT
Template Known Secondary structure  T
SS

TT
TTT

S
T
TT
TT



STTS
....S
Template Predicted Secondary structure 



























....


Template SS confidence 















































































   74.....80.........90.........100.........110.........120.........130.........140...... ...
 
   86...90.........100.........110.........120.........130.........140 .........150.........160.
Predicted Secondary structure 




























..












..
Query SS confidence 






















































. .




















. .
Query Sequence  DLNNLTFDRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTAD. . YPCTVGFPFAFKEGELRRYYE. .
Query Conservation             
 
     
           
    
 




 
 
        ..               
     ..
Alig confidence 






















































..




















..
Template Conservation            

 
                        




 
                       
  

   
  
Template Sequence  ITDLSDSPKRWAGLLAWYSLIHXGPGELPDALVALRXAVEDGGGLLXSFFSGPSLEPXYHPVATAYRWPLPELAQALETA
Template Known Secondary structure  TGGGGGS


SSSTT

TTTTT

SS


SSS


Template Predicted Secondary structure 










































Template SS confidence 















































































   150.........160.........170.........180.........190.........200.........210.........220.........
 
   162.......170.........180.........190......
Predicted Secondary structure 








Query SS confidence 


































Query Sequence  GWERVKYNEDVGELHRTDANGNRIKLRFATMLARK
Query Conservation     
    
                  
  




Alig confidence 













.............







Template Conservation 

  
        
.............     

 
Template Sequence  GFQVTSSHWDPRFP. . . . . . . . . . . . . HAYLTAEA
Template Known Secondary structure  T
TTSS.............
Template Predicted Secondary structure 






.............
Template SS confidence 


































   230.........240... ......250.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions