Return to main results Retrieve Phyre Job Id

Job DescriptionP25397
Confidence99.85%DateThu Jan 5 11:41:47 GMT 2012
Rank34Aligned Residues190
% Identity11%Templatec3ggdA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of sam-dependent methyltransferase (yp_325210.1)2 from anabaena variabilis atcc 29413 at 2.11 a resolution
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  YFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDL
Query Conservation                
   
       






 
     

  
  
   
 
   
                      
Alig confidence 















































































Template Conservation                            






 
     

     
 
 
 
   
  
        
     
    
Template Sequence  LWDANVERAVVVDLPRFELLFNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTAANISYRLLDGLVP
Template Known Secondary structure  TT


GGGTTTTS
TTS
T
TTSSS
S
S

TT

TT
Template Predicted Secondary structure 

































Template SS confidence 















































































   33......40.........50.........60.........70.........80.........90.........100.........110..
 
   88.90.. .......100.........110.........120.........130.........140.. ...
Predicted Secondary structure 




...























...................


Query SS confidence 




. . .

















































. . . . . . . . . . . . . . . . . . .


Query Sequence  NNLTF. . . DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYP. . . . . . . . . . . . . . . . . . . CTV
Query Conservation       ...    
 
     
           
    
 




 
 
          ...................   
Alig confidence 




...

















































...................


Template Conservation             
 

            
    
      
 


 
 
                                
Template Sequence  EQAAQIHSEIGDANIYXRTGFHHIPVEKRELLGQSLRILLGKQGAXYLIELGTGCIDFFNSLLEKYGQLPYELLLVXEHG
Template Known Secondary structure 
S
SSSTTS
GGGTTT

TTSS

TTT
Template Predicted Secondary structure 































Template SS confidence 















































































   113......120.........130.........140.........150.........160.........170.........180.........190..
 
   146...150.........160.........170.........180.........190.......
Predicted Secondary structure 

















Query SS confidence 



















































Query Sequence  GFPFAFKEGELRRYYEGWERVKYNEDVGELHRTDANGNRIKLRFATMLARKK
Query Conservation            
        
    
                  
  




 
Alig confidence 



















































Template Conservation           
      
 


             
       
  
 

  
Template Sequence  IRPGIFTAEDIELYFPDFEILSQGEGLFQSIHKLPDGNYATPPAFWAVIKHR
Template Known Secondary structure 







TT

B


S
B
TTS
B


B
Template Predicted Secondary structure 





























Template SS confidence 



















































   193......200.........210.........220.........230.........240....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions