Return to main results Retrieve Phyre Job Id

Job DescriptionP25397
Confidence99.87%DateThu Jan 5 11:41:47 GMT 2012
Rank16Aligned Residues177
% Identity15%Templatec3g5lA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative s-adenosylmethionine dependent PDBTitle: crystal structure of putative s-adenosylmethionine2 dependent methyltransferase from listeria monocytogenes
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50... ......60.........70.........80.........90.....
Predicted Secondary structure 















.
































Query SS confidence 




































.









































Query Sequence  RTHSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGY. DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQ
Query Conservation       
   
       






 
     

  
 . 
   
 
   
                              
Alig confidence 




































.
























..














Template Conservation   
   
   

   
  






 
     

  
   
  

 
                 ..               
Template Sequence  GEWHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVC. . YEQKAIEDIAIEPDA
Template Known Secondary structure  TT



TT
T
TT
TT
SS



TT..

GGG



TT
Template Predicted Secondary structure 




























..














Template SS confidence 















































































   2930.........40.........50.........60.........70.........80.........90. ........100......
 
   96...100.........110.........120.........130.........140......
Predicted Secondary structure 
























.............................
Query SS confidence 


















































. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  YDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVG. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation   
 
     
           
    
 




 
 
              .............................
Alig confidence 












..



































.............................
Template Conservation   
 
         ..      
    
 




 

                                            
Template Sequence  YNVVLSSLALHYI. . ASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLG
Template Known Secondary structure  S
GGG
..S

SSSS
S

SS






TT


TT
Template Predicted Secondary structure 






..










































Template SS confidence 















































































   107..110......... 120.........130.........140.........150.........160.........170.........180....
 
   147..150.........160 .........170 .........180.........190.......
Predicted Secondary structure  ...





..


...







Query SS confidence  . . .













. .









. . .


























Query Sequence  . . . FPFAFKEGELRRYY. . EGWERVKYNE. . . DVGELHRTDANGNRIKLRFATMLARKK
Query Conservation  ...         
    ..    
    
...                  
  




 
Alig confidence  ...













..









...


























Template Conservation                  
  


 
    
                   
  
 
 


 
Template Sequence  EDVQKYHRTVTTYIQTLLKNGFQINSVIEPEPAPELKDLPEMQDEYRRPMMLLISATKQ
Template Known Secondary structure 


TT




GGGSS
GGGGGGGTS


Template Predicted Secondary structure 




















Template SS confidence 


























































   185....190.........200.........210.........220.........230.........240...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions