Job Description P25397 Confidence 98.94% Date Thu Jan 5 11:41:47 GMT 2012 Rank 253 Aligned Residues 102 % Identity 15% Template c3fuxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dimethyladenosine transferase; PDBTitle: t. thermophilus 16s rrna a1518 and a1519 methyltransferase (ksga) in2 complex with 5'-methylthioadenosine in space group p212121 Resolution 1.68 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		I	R	D	E	N	Y	F	T	D	K	Y	E	L	T	R	T	H	S	E	.	V	L	E	A	V	K	V	V	K	P	G	K	T	L	D	L	G	C	G	N	G	R	N	S	L	Y	L	A	A	N	G	Y	D	V	D	A	W	D	K	N	A	M	S	I	A	N	V	E	R	I	K	S	I	E	N	L	D	N	L	H
Query Conservation																					.
Alig confidence																					.								.
Template Conservation																													.
Template Sequence		L	F	A	D	K	R	F	G	Q	N	F	L	V	S	E	A	H	L	R	R	I	V	E	A	A	R	P	.	F	T	G	P	V	F	E	V	G	P	G	L	G	A	L	T	R	A	L	L	E	A	G	A	E	V	T	A	I	E	K	D	L	R	L	R	P	V	L	E	E	T	L	S	G	L	P	V	R	L	V	F
Template Known Secondary structure						G	G	G	T																				.			S								T	T	S									T	T								S		G	G	G								T	T	T	S
Template Predicted Secondary structure																													.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	V	V	D	L	N	N	L	T	F	D	R	Q	Y	D	F	I	L	S	T	V	V	L	M
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		Q	D	A	L	L	Y	P	W	E	E	V	P	Q	G	.	S	L	L	V	A	N	L	P	Y	H
Template Known Secondary structure		S		G	G	G	S		G	G	G	S		T	T	.									T	T
Template Predicted Secondary structure																.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions