Job Description P25397 Confidence 99.78% Date Thu Jan 5 11:41:47 GMT 2012 Rank 84 Aligned Residues 148 % Identity 22% Template c3dmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable ribosomal rna small subunit methyltransferase; PDBTitle: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex2 with adohcy Resolution 1.55 Å

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		20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		S	E	V	L	E	A	V	K	V	V	.	.	K	P	G	K	T	L	D	L	G	C	G	N	G	R	N	S	L	Y	L	A	A	N	G	Y	D	V	D	A	W	D	K	N	A	M	S	I	A	N	V	E	R	I	K	S	I	E	N	L	D	N	L	H	T	R	V	V	D	L	N	N	L	T	F	D	R	Q	Y	D
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		E	A	L	Q	E	R	L	G	P	E	G	V	R	G	R	Q	V	L	D	L	G	A	G	Y	G	A	L	T	L	P	L	A	R	M	G	A	E	V	V	G	V	E	D	D	L	A	S	V	L	S	L	Q	K	G	L	E	A	N	A	L	K	A	Q	A	L	H	S	D	V	D	E	A	L	T	E	E	A	R	F	D
Template Known Secondary structure										T	T	T	T	T	T							T		T	T	S	T	T							T	T								S	B														T	T									S	T	T	T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		98	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		F	I	L	S	T	V	V	L	M	F	.	.	.	L	E	A	K	T	I	P	G	L	I	A	N	M	Q	R	C	T	K	P	G	G	Y	N	L	I	V	A	A	M	D	T	A	D	Y	P	C	T	V	G	F	P	F	A	F	K	E	G	E	L	R	R	Y	Y	E	G	W	E	R	V	K	Y	N	E	D	V	G	E
Query Conservation												.	.	.
Alig confidence												.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Sequence		I	I	V	T	N	P	P	F	H	V	G	G	A	V	I	L	D	V	A	Q	A	F	V	N	V	A	A	A	R	L	R	P	G	G	V	F	F	L	V	S	N	.	.	.	.	.	.	.	.	.	.	.	.	P	F	L	K	Y	E	P	L	L	E	E	K	F	G	A	F	Q	T	L	K	V	A	E	.	.	.	.
Template Known Secondary structure											T	T		S	S																												.	.	.	.	.	.	.	.	.	.	.	.	T	T	S											S								S	S	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.													.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	R	T	D	A	N	G	N	R	I	K	L	R	F	A	T	M	L	A	R	K	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	V	L	F	A	E	K	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																365	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions