Return to main results Retrieve Phyre Job Id

Job DescriptionP25397
Confidence95.58%DateThu Jan 5 11:41:47 GMT 2012
Rank314Aligned Residues89
% Identity20%Templatec3c24A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase (yp_511008.1) from2 jannaschia sp. ccs1 at 1.62 a resolution
Resolution1.62 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40. .. ......50.........60.........70.........80.........90.........100...
Predicted Secondary structure 









..
.






































Query SS confidence 














. .

.



























































Query Sequence  KVVKPGKTLDLGCGN. . GR. NSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTV
Query Conservation         






 ..
 .    

  
  
   
 
   
                               
 
    
Alig confidence 














..

.










































................
Template Conservation       


 


 
 
 
      
   
  
                
    
  
    

................
Template Sequence  NDVGPKTVAILGAGGKXGARITRKIHDSAHHLAAIEIAPEGRDRLQGXGIPLTDGDGWIDEAD. . . . . . . . . . . . . . . . V
Template Known Secondary structure 
S



TTTSSSS

STT




SSGGGGT
S................
Template Predicted Secondary structure 




















................
Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60........ .
 
   104.....110.........120.........130.
Predicted Secondary structure 








Query SS confidence 



























Query Sequence  VLMFLEAKTIPGLIANMQRCTKPGGYNL
Query Conservation   
           
    
 




 
 
Alig confidence 



























Template Conservation 




 
     
   
   
  
  

Template Sequence  VVLALPDNIIEKVAEDIVPRVRPGTIVL
Template Known Secondary structure 
S
GGGS
TT
Template Predicted Secondary structure 






Template SS confidence 



























   70.........80.........90.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions