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Job DescriptionP25397
Confidence99.31%DateThu Jan 5 11:41:47 GMT 2012
Rank214Aligned Residues126
% Identity13%Templatec3c0kB_
PDB info PDB header:transferaseChain: B: PDB Molecule:upf0064 protein yccw; PDBTitle: crystal structure of a ribosomal rna methyltranferase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50. ........60.........70..... ....80..
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Query Sequence  ENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN. GYDVDAWDKNAMSIANVERIKSIE. . NLDNLHT
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Template Sequence  QHGHKTGYYLDQRDSRLATR. RYVENKRVLNCFSYTGGFAVSALXGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEF
Template Known Secondary structure  TTSSTTSS
GGG.
TT
T
TTTTT
SS
TT

GGG
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   197..200.........210...... ...220.........230.........240.........250.........260.........270.....
 
   83......90... ......100. ........110.........120.........130....
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Query Sequence  RVVDLNNLTFD. . . . . RQYDFILS. . . . . . . . . TVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA
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Template Sequence  VRDDVFKLLRTYRDRGEKFDVIVXDPPKFVENKSQLXGAC. . RGYKDINXLAIQLLNEGGILLTFS
Template Known Secondary structure  S
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   276...280.........290.........300.........310..... ....320.........330.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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