Job Description P25397 Confidence 99.16% Date Thu Jan 5 11:41:47 GMT 2012 Rank 234 Aligned Residues 156 % Identity 20% Template c3bt7A_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:trna (uracil-5-)-methyltransferase; PDBTitle: structure of e. coli 5-methyluridine methyltransferase trma2 in complex with 19 nucleotide t-arm analogue Resolution 2.43 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	V	L	E	A	V	K	V	V	K	P	G	K	T	L	D	L	G	C	G	N	G	R	N	S	L	Y	L	A	A	N	G	Y	D	V	D	A	W	D	K	N	A	M	S	I	A	N	V	E	R	I	K	S	I	E	N	L	D	N	L	H	T	R	V	V	D	L	N	N	L	T	F	D	R	Q	Y	D	F	I
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		E	W	A	L	D	V	T	K	.	G	S	K	G	D	L	L	E	L	Y	C	G	N	G	N	F	S	L	A	L	A	R	N	F	D	R	V	L	A	T	E	I	A	K	P	S	V	A	A	A	Q	Y	N	I	A	A	N	H	I	D	N	V	Q	I	I	R	M	A	A	E	E	F	T	Q	A	M	N	G	V	R	E
Template Known Secondary structure								T	T	.	T			S						S		T	T	S							G	G	G	S	S																						T	T			S								S								S	S
Template Predicted Secondary structure										.
Template SS confidence
		201	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.											.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	T	V	V	L	M	.	.	.	.	.	.	.	.	.	.	F	L	E	A	K	T	I	P	G	L	I	A	N	M	Q	R	C	T	K	P	G	G	Y	N	L	I	V	A	A	M	D	T	A	D	Y	P	C	T	V	G	F	P	F	A	F	K	E	G	E	L	R	R	Y	Y	E	G	W	E	R	V	K	Y	N
Query Conservation									.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.						.																															.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																								.																															.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		F	N	R	L	Q	G	I	D	L	K	S	Y	Q	C	E	T	I	F	V	D	P	P	.	R	S	G	L	D	S	E	T	E	K	M	V	Q	A	Y	P	R	I	L	Y	I	S	C	N	P	E	T	L	C	K	.	.	.	.	.	.	.	.	.	.	.	.	N	L	E	T	L	S	Q	T	H	K	V	E	R	.	.
Template Known Secondary structure			T	T	G	G	G	S		G	G	G												.	T	T											T	T	S	S							S								.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Predicted Secondary structure																								.																															.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.													.	.	.	.	.	.	.	.	340	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	V	G	E	L	H	R	T	D	A	N	G	N	R	I	K	L	R	F	A	T	M	L	A	R	K
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	L	A	L	F	D	Q	F	P	Y	T	H	H	M	Q	C	G	V	L	L	T	A	K
Template Known Secondary structure		.	.	.	.	.							S	T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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