Job Description P25397 Confidence 98.67% Date Thu Jan 5 11:41:47 GMT 2012 Rank 267 Aligned Residues 123 % Identity 15% Template c2r6zA_ PDB info PDB header:transferase Chain: A: PDB Molecule:upf0341 protein in rsp 3' region; PDBTitle: crystal structure of the sam-dependent methyltransferase2 ngo1261 from neisseria gonorrhoeae, northeast structural3 genomics consortium target ngr48 Resolution 1.80 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.								.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.																	.												.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.																	.												.	.	.	.	.
Query Sequence		V	L	E	A	V	K	V	V	K	P	G	K	T	L	D	L	G	C	G	N	G	R	N	S	L	Y	L	A	A	N	G	Y	D	V	D	A	W	D	K	N	.	.	.	.	.	.	.	A	M	S	I	A	N	V	E	R	I	K	S	I	E	N	L	.	D	N	L	H	T	R	V	V	D	L	N	.	.	.	.	.
Query Conservation																																										.	.	.	.	.	.	.																	.												.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.																	.												.	.	.	.	.
Template Conservation
Template Sequence		I	A	K	A	V	N	H	T	A	H	P	T	V	W	D	A	T	A	G	L	G	R	D	S	F	V	L	A	S	L	G	L	T	V	T	A	F	E	Q	H	P	A	V	A	C	L	L	S	D	G	I	R	R	A	L	L	N	P	E	T	Q	D	T	A	A	R	I	N	L	H	F	G	N	A	A	E	Q	X	P	A
Template Known Secondary structure						T	T	G	G	G							T	T		T	T										T	T																										S								T	T						S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		N	L	T	F	D	R	Q	Y	D	F	I	L	S	T	V	V	L	M	F	L	.	.	.	.	.	E	A	K	T	I	P	G	L	I	A	N	M	Q	R	C	T	K	P	G	G	Y	N	L	I	V	A	A	M	D	T	A	D	Y	P	C	T	V	G
Query Conservation																						.	.	.	.	.
Alig confidence																						.	.	.	.	.																.	.
Template Conservation																																										.	.
Template Sequence		L	V	K	T	Q	G	K	P	D	I	V	Y	L	D	P	X	X	A	Y	F	H	R	L	V	G	E	A	Q	D	E	V	V	L	L	H	T	A	R	Q	T	.	.	A	K	K	R	V	V	V	K	R	P	R	L	G	E	H	L	A	G	Q	A	P
Template Known Secondary structure										S																S																.	.		S	S								T	T				G	G	G
Template Predicted Secondary structure																																										.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions