Job Description P25397 Confidence 90.03% Date Thu Jan 5 11:41:47 GMT 2012 Rank 359 Aligned Residues 89 % Identity 15% Template c2k4mA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0146 protein mth_1000; PDBTitle: solution nmr structure of m. thermoautotrophicum protein2 mth_1000, northeast structural genomics consortium target3 tr8 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																	.	.															.									.
Query SS confidence																	.	.															.									.
Query Sequence		T	R	T	H	S	E	V	L	E	A	V	K	V	V	K	.	.	P	G	K	T	L	D	L	G	C	G	N	G	R	N	.	S	L	Y	L	A	A	N	G	.	Y	D	V	D	A	W	D	K	N	A	M	S	I	A	N	V	E	R	I	K	S	I	E	N	L	D	N	L	H	T	R	V	V	D	L	N	N	L	T
Query Conservation																	.	.															.									.
Alig confidence																	.	.															.									.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	H	M	W	N	D	L	A	V	Y	I	I	R	C	S	G	P	G	T	R	V	V	E	V	G	A	G	R	F	L	Y	V	S	D	Y	I	R	K	H	S	K	V	D	L	V	L	T	D	I	K	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	G	I	V	R	D	D	I	T	S	P	R
Template Known Secondary structure																S		S	S	S						T		T	T												S									S	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T						S	S	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70																.	.	.	.	.	.	.	.	.	80	.	.	.
		92			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure			.	.																	.
Query SS confidence			.	.																	.
Query Sequence		F	.	.	D	R	Q	Y	D	F	I	L	S	T	V	V	L	M	F	L	.	E	A	K	T	I	P	G	L	I	A	N	M	Q	R	C	T	K
Query Conservation			.	.																	.
Alig confidence			.	.										.	.	.	.	.	.		.
Template Conservation														.	.	.	.	.	.
Template Sequence		M	E	I	Y	R	G	A	A	L	I	Y	S	.	.	.	.	.	.	I	R	P	P	A	E	I	H	S	S	L	M	R	V	A	D	A	V	G
Template Known Secondary structure						T	T							.	.	.	.	.	.		S			T	T	T												T
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.							.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions