Job Description P25397 Confidence 98.48% Date Thu Jan 5 11:41:47 GMT 2012 Rank 275 Aligned Residues 128 % Identity 18% Template c2frxD_ PDB info PDB header:transferase Chain: D: PDB Molecule:hypothetical protein yebu; PDBTitle: crystal structure of yebu, a m5c rna methyltransferase from e.coli Resolution 2.90 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																										.	.	.
Query SS confidence																.	.																										.	.	.
Query Sequence		Y	E	L	T	R	T	H	S	E	V	L	E	A	V	.	.	K	V	V	K	P	G	K	T	L	D	L	G	C	G	N	G	R	N	S	L	Y	L	A	A	N	.	.	.	G	Y	D	V	D	A	W	D	K	N	A	M	S	I	A	N	V	E	R	I	K	S	I	E	N	L	D	N	L	H	T	R	V	V	D	L
Query Conservation																.	.																										.	.	.
Alig confidence																.	.																										.	.	.
Template Conservation
Template Sequence		Y	I	Q	E	A	S	S	X	L	P	V	A	A	L	F	A	D	G	N	A	P	Q	R	V	X	D	V	A	A	A	P	G	S	K	T	T	Q	I	S	A	R	X	N	N	E	G	A	I	L	A	N	E	F	S	A	S	R	V	K	V	L	H	A	N	I	S	R	C	G	I	S	N	V	A	L	T	H	F	D	G
Template Known Secondary structure																	T	T	T				S					S	S		T	T	S										T	T	T		S							S	S															T			S								S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		88	.	90	.	.			.	.	.	.	.	.	.	100	.														.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Query SS confidence							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Query Sequence		N	N	L	T	F	.	.	D	R	Q	Y	D	F	I	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	V	L	M	F	L	E	A	K	T	I	P	.	.	.	.	.	.	.	G	L	I	A	N	M	Q	R	C	T	K	P	G	G	Y	N	L	I	V	A	A	M	D	T	A	D
Query Conservation							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Alig confidence							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	F	G	A	A	V	P	E	X	F	D	A	I	L	L	D	A	P	C	S	G	E	G	V	V	R	K	D	P	D	A	L	K	N	W	S	P	E	S	N	Q	E	I	A	A	T	Q	R	E	L	I	D	S	A	F	H	A	L	R	P	G	G	T	L	V	Y	S	T	C	T	L	N	Q	E
Template Known Secondary structure		T	T					S	T	T														G	G	G	G	G	T		T	T	S	S	S	S																							T												S			S	S	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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