Job Description P25397 Confidence 98.99% Date Thu Jan 5 11:41:47 GMT 2012 Rank 249 Aligned Residues 108 % Identity 21% Template c1uwvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:23s rrna (uracil-5-)-methyltransferase ruma; PDBTitle: crystal structure of ruma, the iron-sulfur cluster2 containing e. coli 23s ribosomal rna 5-methyluridine3 methyltransferase Resolution 1.95 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.
Query Sequence		S	E	V	L	E	A	V	K	V	V	K	P	G	K	T	L	D	L	G	C	G	N	G	R	N	S	L	Y	L	A	A	N	G	Y	D	V	D	A	W	D	K	N	A	M	S	I	A	N	V	E	R	I	K	S	I	E	N	L	D	N	L	H	T	R	V	V	D	L	N	N	L	T	.	.	.	.	.	F	D	R
Query Conservation																																																																										.	.	.	.	.
Alig confidence																																																																										.	.	.	.	.
Template Conservation
Template Sequence		A	R	A	L	E	W	L	D	V	Q	P	E	D	R	V	L	D	L	F	C	G	X	G	N	F	T	L	P	L	A	T	Q	A	A	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	N	V	T	F	Y	H	E	N	L	E	E	D	V	T	K	Q	P	W	A	K	N
Template Known Secondary structure									T			T	T							S		T	T	T	T	T						T	T	S	S							S															T	T			S								T	T	S			S	S	S	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		Q	Y	D	F	I	L	S	T	V	V	L	M	F	L	E	A	K	T	.	.	I	P	G	L	I	A	N	M	Q	R	C	T	K	P	G	G	Y	N	L	I	V	A	A
Query Conservation																				.	.
Alig confidence								.	.	.	.	.	.	.						.	.											.
Template Conservation								.	.	.	.	.	.	.																		.
Template Sequence		G	F	D	K	V	L	.	.	.	.	.	.	.	L	D	P	A	R	A	G	A	A	G	V	X	Q	Q	I	I	K	.	L	E	P	I	R	I	V	Y	V	S	C	N
Template Known Secondary structure				S				.	.	.	.	.	.	.					T	T												.				S							S
Template Predicted Secondary structure								.	.	.	.	.	.	.																		.
Template SS confidence
		356	.	.	.	360	.								.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions