Return to main results Retrieve Phyre Job Id

Job DescriptionP25397
Confidence83.95%DateThu Jan 5 11:41:47 GMT 2012
Rank391Aligned Residues101
% Identity16%Templatec1txgA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad(p)+]; PDBTitle: structure of glycerol-3-phosphate dehydrogenase from archaeoglobus2 fulgidus
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40. ........50.........60.........70.........80.........90.........100.........
Predicted Secondary structure 




..













































Query SS confidence 









. .



































































Query Sequence  GKTLDLGCGN. . GRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTVVLMFLE
Query Conservation    






 ..
     

  
  
   
 
   
                               
 
     
    
Alig confidence 









..



































































Template Conservation 


 




  
   
  
   
  


  
         
                      
       





 
 
Template Sequence  MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS
Template Known Secondary structure 
S





GGGTT

BTTTTB


S
GGGTT
S
S
Template Predicted Secondary structure 
































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   110.........120.........130..
Predicted Secondary structure 


Query SS confidence 






















Query Sequence  AKTIPGLIANMQRCTKPGGYNLI
Query Conservation         
    
 




 
 
Alig confidence 






















Template Conservation            
   
    

  
Template Sequence  TDGVLPVMSRILPYLKDQYIVLI
Template Known Secondary structure  GGGTTT

S

Template Predicted Secondary structure 




Template SS confidence 






















   81........90.........100...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions