Return to main results Retrieve Phyre Job Id

Job DescriptionP39404
Confidence99.22%DateThu Jan 5 12:00:37 GMT 2012
Rank67Aligned Residues120
% Identity12%Templatec3t6kB_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:response regulator receiver; PDBTitle: crystal structure of a hypothetical response regulator (caur_3799)2 from chloroflexus aurantiacus j-10-fl at 1.86 a resolution
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80... .
Predicted Secondary structure 











































..
Query SS confidence 












































































. .
Query Sequence  KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIK. . F
Query Conservation      
 



  
   

   
                              

  
 
       
      
   .. 
Alig confidence 

























...

























...


















..
Template Conservation 
   





       
   
   
...  
        
         




...
  
    
      

     
Template Sequence  KPHTLLIVDDDDTVAEXLELVLRGAG. . . YEVRRAASGEEALQQIYKNLPDALIC. . . DVLLPGIDGYTLCKRVRQHPLT
Template Known Secondary structure 



S
TT...
SSS

S...S

SSS
SGGG
Template Predicted Secondary structure 







...








...











Template SS confidence 















































































   2.......10.........20....... ..30.........40.........50... ......60.........70.....
 
   85....90.........100.........110.........120.........130..
Predicted Secondary structure 






















Query SS confidence 















































Query Sequence  PRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN
Query Conservation      

 

              
                        
Alig confidence 















































Template Conservation      

  
              
    
 

     
   
   
 
Template Sequence  KTLPILXLTAQGDISAKIAGFEAGANDYLAKPFEPQELVYRVKNILAR
Template Known Secondary structure  TT


TT
T
STT


Template Predicted Secondary structure 






















Template SS confidence 















































   76...80.........90.........100.........110.........120...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions