Job Description P39404 Confidence 98.79% Date Thu Jan 5 12:00:37 GMT 2012 Rank 122 Aligned Residues 116 % Identity 12% Template c3lufB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:two-component system response regulator/ggdef PDBTitle: structure of probable two-component system response2 regulator/ggdef domain protein Resolution 1.76 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	N	V	A	L	I	E	K	C	V	M	S	S	I	G	I	E	S	L	F	R	K	F	A	G	N	P	Y	K	L	H	T	Y	T	S	Q	E	S	F	Q	D	A	M	S	R	I	S	F	A	A	V	I	F	S	F	S	A	M	R	S	E	R	R	E	G	L	S	C	L	T	E	L	A	I	K	F	P	R	T
Query Conservation
Alig confidence																												.	.																										.	.	.	.																				.	.
Template Conservation																												.	.																										.	.	.	.																				.	.
Template Sequence		K	Q	K	I	L	I	V	E	D	S	X	T	I	R	R	X	L	I	Q	A	I	A	Q	Q	T	G	.	.	L	E	I	D	A	F	D	T	L	E	G	A	R	H	C	Q	G	D	E	Y	V	V	A	L	V	.	.	.	.	D	L	T	L	P	D	A	P	S	G	E	A	V	K	V	L	L	E	R	.	.	G	L
Template Known Secondary structure																										S		.	.							S	S	T	G	G	G	T	T			T	T	T							.	.	.	.		S	S	B	T	T	B	T	T	S									T	.	.	T
Template Predicted Secondary structure																												.	.																										.	.	.	.																				.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	L	V	I	A	D	D	D	I	E	A	R	L	I	G	S	L	S	P	S	P	L	D	G	V	L	S	K	A	S	T	L	E	I	F	H	Q	E	L	F	L	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	V	I	L	T	A	D	I	S	E	D	K	R	E	A	W	L	E	A	G	V	L	D	Y	V	X	K	D	S	R	H	S	L	Q	Y	A	V	G	L	V	H	R	L
Template Known Secondary structure								S													T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions