Return to main results Retrieve Phyre Job Id

Job DescriptionP39404
Confidence82.60%DateThu Jan 5 12:00:37 GMT 2012
Rank311Aligned Residues33
% Identity18%Templatec3kjxD_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:transcriptional regulator, laci family; PDBTitle: crystal structure of a transcriptional regulator, lacl2 family protein from silicibacter pomeroyi
Resolution2.33 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   168.170.........180.... .....190.........200
Predicted Secondary structure 




..............




Query SS confidence 
















. . . . . . . . . . . . . .















Query Sequence  YSMTQIAEQLKRNIKTI. . . . . . . . . . . . . . RAHKFNVMSKLGVSSD
Query Conservation   
  


  
 

  

..............  
   
  



 
 
Alig confidence 
















..............















Template Conservation 


 


  



  






    

  

 

   
  


 
 
Template Sequence  LTLRDVSEASGVSEXTVSRVLRNRGDVSDATRARVLAAAKELGYVPN
Template Known Secondary structure 

T
S
TT

S


TTTST



Template Predicted Secondary structure 
















Template SS confidence 














































   910.........20.........30.........40.........50.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions