Job Description P39404 Confidence 98.75% Date Thu Jan 5 12:00:37 GMT 2012 Rank 124 Aligned Residues 118 % Identity 7% Template c3h5iA_ PDB info PDB header:transcription Chain: A: PDB Molecule:response regulator/sensory box protein/ggdef PDBTitle: crystal structure of the n-terminal domain of a response2 regulator/sensory box/ggdef 3-domain protein from3 carboxydothermus hydrogenoformans Resolution 1.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	V	A	L	I	E	K	C	V	M	S	S	I	G	I	E	S	L	F	R	K	F	A	G	N	P	Y	K	L	H	T	Y	T	S	Q	E	S	F	Q	D	A	M	S	R	I	S	F	A	A	V	I	F	S	F	S	A	M	R	S	E	R	R	E	G	L	S	C	L	T	E	L	A	I	K	F	P	R	T	R
Query Conservation
Alig confidence																											.	.																											.	.	.
Template Conservation																											.	.																											.	.	.
Template Sequence		K	K	I	L	I	V	E	D	S	K	F	Q	A	K	T	I	A	N	I	L	N	K	Y	G	Y	.	.	T	V	E	I	A	L	T	G	E	A	A	V	E	K	V	S	G	G	W	Y	P	D	L	I	L	M	.	.	.	D	I	E	L	G	E	G	M	D	G	V	Q	T	A	L	A	I	Q	Q	I	S	E	L	P
Template Known Secondary structure									S															T	T		.	.						S	S										T	T				S					.	.	.		S	S		S	S	S
Template Predicted Secondary structure																											.	.																											.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	V	I	A	D	D	D	I	E	A	R	L	I	G	S	L	S	P	S	P	L	D	G	V	L	S	K	A	S	T	L	E	I	F	H	Q	E	L	F	L	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	F	L	T	A	H	T	E	P	A	V	V	E	K	I	R	S	V	T	A	Y	G	Y	V	M	K	S	A	T	E	Q	V	L	I	T	I	V	E	M	A	L	R
Template Known Secondary structure							S	S	S	S					G	G	G	G	G	S								T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions