Return to main results Retrieve Phyre Job Id

Job DescriptionP39404
Confidence99.06%DateThu Jan 5 12:00:37 GMT 2012
Rank92Aligned Residues117
% Identity14%Templatec3gl9B_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:response regulator; PDBTitle: the structure of a histidine kinase-response regulator2 complex sheds light into two-component signaling and3 reveals a novel cis autophosphorylation mechanism
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80.. ....
Predicted Secondary structure 








































..



Query SS confidence 









































































. .



Query Sequence  RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAI. . KFPR
Query Conservation    
 



  
   

   
                              

  
 
       
      
  ..    
Alig confidence 























...
























....

















..



Template Conservation   






       
   
   
...  
       

         
 

....        
      

       
Template Sequence  KKVLLVDDSAVLRKIVSFNLKKEG. . . YEVIEAENGQIALEKLSEFTPDLIV. . . . LIMMPVMDGFTVLKKLQEKEEWKR
Template Known Secondary structure 

S
TT...
SSTT


S....



SSS

TTTTT
Template Predicted Secondary structure 





...










....















Template SS confidence 















































































   3......10.........20...... ...30.........40.........50. ........60.........70.....
 
   87..90.........100.........110.........120.........130..
Predicted Secondary structure 




















Query SS confidence 













































Query Sequence  TRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN
Query Conservation    

 

              
                        
Alig confidence 













































Template Conservation    

  
              
    
 

     
   
   
  
Template Sequence  IPVIVLTAKGGEEDESLALSLGARKVMRKPFSPSQFIEEVKHLLNE
Template Known Secondary structure  S
S

STT
SSS

T
Template Predicted Secondary structure 















Template SS confidence 













































   77..80.........90.........100.........110.........120..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions