Job Description P39404 Confidence 81.81% Date Thu Jan 5 12:00:37 GMT 2012 Rank 316 Aligned Residues 58 % Identity 14% Template c3gbgA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:tcp pilus virulence regulatory protein; PDBTitle: crystal structure of toxt from vibrio cholerae o395 Resolution 1.90 Å

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		I	L	R	F	M	S	R	G	Y	S	M	T	Q	I	A	E	Q	L	K	R	N	I	K	T	I	R	A	H	K	F	N	V	M	S	K	L	G	V	S	S	D	A	G	L	.	.	.	.	L	E	A	A	D	I	L	L	C	M	R	H	C	E	T	S	N	V
Query Conservation																																														.	.	.	.
Alig confidence																							.	.	.	.																				.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence		V	K	S	D	I	T	R	N	W	R	W	A	D	I	C	G	E	L	R	T	N	.	.	.	.	R	M	I	L	K	K	E	L	E	S	R	G	V	K	F	R	E	L	I	N	S	I	R	I	S	Y	S	I	S	L	M	K	T	G	E	F	K	I	K	Q	I
Template Known Secondary structure					T	T	T	S												T			.	.	.	.										T	T	T																						T
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions