Job Description P39404 Confidence 99.69% Date Thu Jan 5 12:00:37 GMT 2012 Rank 12 Aligned Residues 71 % Identity 23% Template c2q0oA_ PDB info PDB header:transcription Chain: A: PDB Molecule:probable transcriptional activator protein trar; PDBTitle: crystal structure of an anti-activation complex in bacterial quorum2 sensing Resolution 2.00 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	N	Q	W	Y	I	N	Q	S	R	T	L	S	P	T	E	R	E	I	L	R	F	M	S	R	G	Y	S	M	T	Q	I	A	E	Q	L	K	R	N	I	K	T	I	R	A	H	K	F	N	V	M	S	K	L	G	V	S	S	D	A	G	L	L	E	A	A	D	I	L	L	C	M	R
Query Conservation
Alig confidence																																																																					.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		I	A	A	K	T	V	L	N	P	K	Q	M	L	S	P	R	E	M	L	C	L	V	W	A	S	K	G	K	T	A	S	V	T	A	N	L	T	G	I	N	A	R	T	V	Q	H	Y	L	D	K	A	R	A	K	L	D	A	E	S	V	P	Q	L	V	A	I	A	.	.	.	K	D	R	G
Template Known Secondary structure					T					G	G	G	S														T	T																													T		S	S									.	.	.			T	T
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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