Job Description P39404 Confidence 89.21% Date Thu Jan 5 12:00:37 GMT 2012 Rank 257 Aligned Residues 64 % Identity 11% Template c2hwvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:dna-binding response regulator vicr; PDBTitle: crystal structure of an essential response regulator dna binding2 domain, vicrc in enterococcus faecalis, a member of the yycf3 subfamily. Resolution 1.90 Å

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.													.	.	.	.	.
Query SS confidence																																			.	.	.	.													.	.	.	.	.
Query Sequence		G	V	R	Q	A	T	D	R	L	N	N	Q	W	Y	I	N	Q	S	R	T	L	S	P	T	E	R	E	I	L	R	F	M	S	.	.	.	.	R	G	Y	S	M	T	Q	I	A	E	Q	L	.	.	.	.	.	K	R	N	I	K	T	I	R	A	H	K	F	N	V	M	S	K	L	G
Query Conservation																																			.	.	.	.													.	.	.	.	.
Alig confidence																																			.	.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		G	D	L	T	I	H	P	D	A	Y	M	V	S	K	R	G	E	K	I	E	L	T	H	R	E	F	E	L	L	Y	Y	L	A	K	H	I	G	Q	V	M	T	R	E	H	L	L	Q	T	V	W	G	Y	D	Y	F	G	D	V	R	T	V	D	V	T	V	R	R	L	R	E	K	I	E
Template Known Secondary structure		T	T					S	S	S	S					T	T																			T	T	T			B										T		G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions