Job Description P77616 Confidence 100.00% Date Thu Jan 5 12:31:08 GMT 2012 Rank 4 Aligned Residues 194 % Identity 25% Template c1z9sA_ PDB info PDB header:chaperone/immune system Chain: A: PDB Molecule:chaperone protein caf1m; PDBTitle: crystal structure of the native chaperone:subunit:subunit2 caf1m:caf1:caf1 complex Resolution 2.20 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	W	G	A	I	I	P	D	R	T	R	I	I	M	N	E	S	D	K	G	E	A	L	K	L	T	N	Q	S	K	N	L	P	Y	L	A	Q	T	W	I	E	D	T	K	G	N	K	S	R	D	F	I	V	T	V	P	P	M	V	R	L	N	P	S	E	Q	I	Q	I	R	M	I	T	Q	E	K	I	A	Q
Query Conservation
Alig confidence																																		.																.	.	.																										.	.
Template Conservation																																		.																.	.	.																										.	.
Template Sequence		S	K	E	Y	G	V	T	I	G	E	S	R	I	I	Y	P	L	D	A	A	G	V	M	V	S	V	K	N	T	Q	D	Y	.	P	V	L	I	Q	S	R	I	Y	D	E	N	K	E	K	.	.	.	P	F	V	V	T	P	P	L	F	R	L	D	A	K	Q	Q	N	S	L	R	I	A	Q	A	G	.	.	G	V
Template Known Secondary structure										S	S	S						T	T		S										S	S	S	.											T	T	S			.	.	.						S	S						T	T											S	.	.
Template Predicted Secondary structure																																		.																.	.	.																										.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	K	D	R	E	T	L	F	Y	F	N	V	R	E	I	P	P	K	T	D	K	K	N	V	M	Q	V	T	M	Q	H	A	L	K	L	F	W	R	P	K	A	I	E	L	E	D	D	G	V	M	T	Y	E	K	V	E	I	I	R	R	N	D	G	S	I	R	F	N	N	K	M	P	Y	H	V	T	L	G	Y
Query Conservation
Alig confidence																					.	.																																					.	.	.
Template Conservation																					.	.																																					.	.	.
Template Sequence		F	P	R	D	K	E	S	L	K	W	L	C	V	K	G	I	P	P	D	.	.	V	G	V	F	V	Q	F	A	I	N	N	C	I	K	L	L	V	R	P	N	E	L	K	G	T	P	I	Q	F	A	E	N	L	S	W	K	.	.	.	V	D	G	G	K	L	I	A	E	N	P	S	P	F	Y	M	N	I	G	E
Template Known Secondary structure				S	S	S															.	.																				T	T	S		S		G	G	G	T	G	G	G					.	.	.			T	T								S	S	S
Template Predicted Secondary structure																					.	.																																					.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		I	G	T	N	G	V	T	M	L	P	Q	T	Q	S	L	M	V	T	P	F	S	Y	A	N	T	Q	F	K	N	V	P	S	T	F	Q	V	G	Y	I	N	D	F	G	G	L	S	.	F	Y	E	I	N	C
Query Conservation																																																.
Alig confidence										.	.	.	.																.	.	.																	.
Template Conservation										.	.	.	.																.	.	.
Template Sequence		L	T	F	G	G	K	S	I	.	.	.	.	P	S	H	Y	I	P	P	K	S	T	W	A	F	D	L	.	.	.	A	R	N	V	S	W	R	I	I	N	D	Q	G	G	L	D	R	L	Y	S	K	N	V
Template Known Secondary structure					T	T				.	.	.	.							T	T								.	.	.									B		T	T	S		B
Template Predicted Secondary structure										.	.	.	.																.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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