Job Description P77616 Confidence 100.00% Date Thu Jan 5 12:31:08 GMT 2012 Rank 1 Aligned Residues 203 % Identity 35% Template c1qpxA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:papd chaperone; PDBTitle: crystal structures of self-capping papd chaperone homodimers Resolution 2.40 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		A	I	I	P	D	R	T	R	I	I	M	N	E	S	D	K	G	E	A	L	K	L	T	N	Q	S	K	N	L	P	Y	L	A	Q	T	W	I	E	D	T	K	G	N	K	.	S	R	D	F	I	V	T	V	P	P	M	V	R	L	N	P	S	E	Q	I	Q	I	R	M	I	T	Q	E	K	I	A	Q	L	P	K
Query Conservation																																														.
Alig confidence																																														.
Template Conservation
Template Sequence		A	V	S	L	D	R	T	R	A	V	F	D	G	S	E	K	S	M	T	L	D	I	S	N	D	N	K	Q	L	P	Y	L	A	Q	A	W	I	E	N	E	N	Q	E	K	I	I	T	G	P	V	I	A	T	P	P	V	Q	R	L	D	P	G	A	K	S	M	V	R	L	S	T	T	P	D	I	S	K	L	P	Q
Template Known Secondary structure						S		S						T	T	S	S											S	S	S											T	T	S				S	S	S	S					S	S						T	T											G	G	G	G	G	S		S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	E	T	L	F	Y	F	N	V	R	E	I	P	P	K	T	D	K	K	N	V	M	Q	V	T	M	Q	H	A	L	K	L	F	W	R	P	K	A	I	E	L	E	D	D	G	V	M	T	Y	E	K	V	E	I	I	R	R	N	D	G	S	I	R	F	N	N	K	M	P	Y	H	V	T	L	G	Y	I	G	T
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		D	R	E	S	L	F	Y	F	N	L	R	E	I	P	P	.	.	.	.	.	.	.	.	.	I	A	L	C	T	K	I	K	L	F	Y	R	P	A	A	I	K	T	R	P	N	E	.	.	V	W	Q	D	Q	L	I	L	N	K	V	S	G	G	Y	R	I	E	N	P	T	P	Y	Y	V	T	V	I	G	L	G	G
Template Known Secondary structure		S	S														.	.	.	.	.	.	.	.	.														G	G	G				T	T		.	.			G	G	G							T	T								S	S	S									S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.										.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		N	G	V	T	M	L	P	Q	T	.	Q	S	L	M	V	T	P	F	S	Y	A	N	T	Q	F	K	N	V	P	S	T	F	Q	V	G	Y	I	N	D	F	G	G	L	S	F	Y	E	I	N	C	P	V	V	N	N	I	C	N	I
Query Conservation											.
Alig confidence											.																			.																							.	.
Template Conservation																														.																							.	.
Template Sequence		S	E	K	Q	A	E	E	G	E	F	E	T	V	M	L	S	P	R	S	E	Q	T	V	K	S	A	N	Y	.	N	T	P	Y	L	S	Y	I	N	D	Y	G	G	R	P	V	L	S	F	I	C	N	.	.	G	S	R	C	S	V
Template Known Secondary structure		S							S									T	T											.	S	S								T	T	S											.	.	T	T
Template Predicted Secondary structure																														.																							.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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