Job Description P77616 Confidence 31.15% Date Thu Jan 5 12:31:08 GMT 2012 Rank 51 Aligned Residues 98 % Identity 17% Template c1e42A_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:ap-2 complex subunit beta; PDBTitle: beta2-adaptin appendage domain, from clathrin adaptor ap2 Resolution 1.7 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																							.	.																													.	.
Query SS confidence																																							.	.																													.	.
Query Sequence		C	M	S	S	I	A	W	G	A	I	I	P	D	R	T	R	I	I	M	N	E	S	D	K	G	E	A	L	K	L	T	N	Q	S	K	N	L	.	.	P	Y	L	A	Q	T	W	I	E	D	T	K	G	N	K	S	R	D	F	I	V	T	V	P	P	M	V	R	.	.	L	N	P	S	E	Q	I	Q	I	R	M
Query Conservation																																							.	.																													.	.
Alig confidence																		.																					.	.							.	.	.	.	.	.																	.	.
Template Conservation																		.																													.	.	.	.	.	.
Template Sequence		W	L	P	A	V	K	A	K	G	L	E	I	S	G	T	F	.	T	H	R	Q	G	H	I	Y	M	E	M	N	F	T	N	K	A	L	Q	H	M	T	D	F	A	I	Q	F	.	.	.	.	.	.	N	K	N	S	F	G	V	I	P	S	T	P	L	A	I	H	T	P	L	M	P	N	Q	S	I	D	V	S	L
Template Known Secondary structure					G	G	G	T	T	T								.				T	T												S	S	S		B								.	.	.	.	.	.			B	T	T					S	S						S		B		T	T
Template Predicted Secondary structure																		.																													.	.	.	.	.	.
Template SS confidence
		714	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.		730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.							.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	Q	E	K	I	A	Q	L	P	K	D	R	E	T	L	F	Y	F	N	V	R	E	I	P	P	K	T	D	K	K	N	V	M	Q	V	T	M	Q	H	A	L	K	L	F	W
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	N	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	V	M	K	M	E	P	L	N	N	L	Q	V	A	V	K	N	N	I	D	V	F	Y
Template Known Secondary structure					S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		B				S	S	T	T									S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		787	.	.	790	.																		.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions