 |
Job Description | P76066 | Confidence | 28.16% | Date | Thu Jan 5 12:18:06 GMT 2012 |
Rank | 179 | Aligned Residues | 54 |
% Identity | 19% | Template | d2g9wa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Penicillinase repressor
|
Resolution | 1.80 |
|
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | |
110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
|
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | C | D | L | T | A | T | I | E | Q | R | G | . |
P | Q | T | A | D | E | L | A | T | L | F | G | . |
. |
. |
. |
T | T | S | R | K | V | A | S | T | L | A | M | A | I | S | K | G | R | L | I | R | V | N | Q | G | G | K | F | R | Y | C | I | P |
Query Conservation |   |
  |
|   |
|
|   |
|
|
|
|
|
|
| . |
|
|
|
|   |
|
|
|
|
|
|
| . | . | . | . |
|   |   |   |   |
|   |
|   |
|   |   |
|
|   |   |
|
|
|
|
|   |   |   |   |
|   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|   |
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |
|
|   |
|   |   | . | . | . | . |
|
|   |   |   |
|   |   |
Template Sequence |   |
L | E | R | A | V | X | D | H | L | W | S | R | T | E | P | Q | T | V | R | Q | V | H | E | A | L | S | A | R | R | D | L | A | Y | T | T | V | X | A | V | L | Q | R | L | A | K | K | N | L | V | L | Q | . |
. |
. |
. |
I | R | A | H | R | Y | A | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
| S | S |
|  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  | . | . | . | . |  |
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  | . | . | . | . |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
|
|
. | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|