Return to main results Retrieve Phyre Job Id

Job DescriptionP76066
Confidence92.55%DateThu Jan 5 12:18:06 GMT 2012
Rank4Aligned Residues44
% Identity14%Templated1z05a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ROK associated domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110.........120.........130.........140....
Predicted Secondary structure 











Query SS confidence 











































Query Sequence  LTATIEQRGPQTADELATLFGTTSRKVASTLAMAISKGRLIRVN
Query Conservation 
 










 







    
 
 
  

  




  
Alig confidence 











































Template Conservation 

  
      

 


   


  


  
  
   


 
  
Template Sequence  VYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLIHETT
Template Known Secondary structure 
SB
T

TTS
Template Predicted Secondary structure 











Template SS confidence 











































   20.........30.........40.........50.........60...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions