 |
Job Description | P76066 | Confidence | 42.77% | Date | Thu Jan 5 12:18:06 GMT 2012 |
Rank | 141 | Aligned Residues | 50 |
% Identity | 14% | Template | d1ulya_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Hypothetical protein PH1932
|
Resolution | 2.50 |
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | I | T | T | A | T | V | A | K | I | S | E | C | D | L | T | A | T | I | E | Q | R | G | P | Q | T | A | D | E | L | A | T | L | F | G | T | T | S | R | K | V | A | S | T | L | A | M | A | I | S | K | G |
Query Conservation |   |
|
|   |
|   |
|
|   |
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |
|   |
|   |
|   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|   |
|   |
|   |   |
|
|   |   |
| . | . |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|
Template Sequence |   |
E | V | I | K | V | X | L | E | D | T | R | R | K | I | L | K | L | L | . |
. |
R | N | K | E | X | T | I | S | Q | L | S | E | I | L | G | K | T | P | Q | T | I | Y | H | H | I | E | K | L | K | E | A | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  | . | . | T | T |
|
| B |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|