Return to main results Retrieve Phyre Job Id

Job DescriptionP76066
Confidence57.05%DateThu Jan 5 12:18:06 GMT 2012
Rank113Aligned Residues66
% Identity14%Templated1aoya_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Arginine repressor (ArgR), N-terminal DNA-binding domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110.........120 .... .....130.........140... ......150.........160.
Predicted Secondary structure 




.


.


.













Query SS confidence 

























.



.


















.

















Query Sequence  KISECDLTATIEQRGPQTADELATLF. GTTS. RKVASTLAMAISKGRLIRV. NQGGKFRYCIPGDNLPAE
Query Conservation 

 
 

 










 





.

  .  
 
 
  

  




 .   
 

 
      
  
Alig confidence 



.




















.



.


















.

















Template Conservation    
 . 

 

    
 

 

   
   
   









 

  


    
   
 

 
   
 
Template Sequence  ELVK. AFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPT
Template Known Secondary structure  T.T



ST
SS

T

TTS


SS


S
Template Predicted Secondary structure  .



























Template SS confidence 





































































   910.. .......20.........30.........40.........50.........60.........70.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions