Return to main results Retrieve Phyre Job Id

Job DescriptionP76066
Confidence88.51%DateThu Jan 5 12:18:06 GMT 2012
Rank17Aligned Residues72
% Identity14%Templatec3cuoB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav; PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   86...90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 





















Query SS confidence 








































































Query Sequence  EEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNL
Query Conservation   

 
 

 

 
 

 










 







    
 
 
  

  




    
 

 
      
Alig confidence 










.




























































Template Conservation    
  

    .
  

  
         


  
 

  


 

  
   


     
    
 
    
Template Sequence  AALLKAMSHPK. RLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAV
Template Known Secondary structure  T
S.TT
S



TS
SS


Template Predicted Secondary structure 

.













Template SS confidence 








































































   15....20..... ....30.........40.........50.........60.........70.........80......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions