Job Description Q7DFV4 Confidence 5.48% Date Thu Jan 5 12:37:42 GMT 2012 Rank 60 Aligned Residues 47 % Identity 11% Template c3d9oB_ PDB info PDB header:transcription Chain: B: PDB Molecule:rna-binding protein 16; PDBTitle: snapshots of the rna processing factor scaf8 bound to different2 phosphorylated forms of the carboxy-terminal domain of rna-polymerase3 ii Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		D	G	V	Q	A	M	R	D	Y	L	A	G	L	D	I	A	S	P	E	H	.	.	.	.	.	Q	V	L	M	N	V	T	A	K	S	E	V	A	P	S	I	I	K	E	N	L	S	L	H	L	T	H
Query Conservation																						.	.	.	.	.
Alig confidence																						.	.	.	.	.
Template Conservation
Template Sequence		E	A	V	K	T	F	N	S	E	L	Y	S	L	X	D	X	K	P	P	I	S	K	A	K	X	T	Q	I	T	K	A	A	I	K	A	I	K	F	Y	K	H	V	V	Q	S	V	E	K	F	I	Q	K
Template Known Secondary structure													G	G	G	G	S		S	S																T	G	G	G
Template Predicted Secondary structure
Template SS confidence
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No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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