Job Description Q7DFV4 Confidence 67.10% Date Thu Jan 5 12:37:42 GMT 2012 Rank 29 Aligned Residues 58 % Identity 9% Template c2zkqc_ PDB info PDB header:ribosomal protein/rna Chain: C: PDB Molecule:rna expansion segment es4; PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		5	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		V	Q	A	M	R	D	Y	L	.	A	G	L	D	I	A	S	P	E	H	Q	V	L	M	N	V	T	A	K	S	E	V	A	P	S	I	I	K	E	N	L	S	L	H	L	T	H	T	V	K	W	T	E	S	L	D	T	F	L	N
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		I	R	E	L	T	A	V	V	Q	K	R	F	G	F	P	E	G	S	V	E	L	Y	A	E	K	V	A	T	R	G	L	C	A	I	A	Q	A	E	S	L	R	Y	K	L	L	G	G	L	A	V	R	R	A	C	Y	G	V	L	R
Template Known Secondary structure													S		T	T	T											S		G	G	G																T
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions