Job Description Q7DFV4 Confidence 68.43% Date Thu Jan 5 12:37:42 GMT 2012 Rank 28 Aligned Residues 59 % Identity 10% Template c2xznC_ PDB info PDB header:ribosome Chain: C: PDB Molecule:kh domain containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		5	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		V	Q	A	M	R	D	Y	L	A	G	.	L	D	I	A	S	P	E	H	Q	V	L	M	N	V	T	A	K	S	E	V	A	P	S	I	I	K	E	N	L	S	L	H	L	T	H	T	V	K	W	T	E	S	L	D	T	F	L	N	M
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		H	K	E	L	T	Q	F	L	Q	K	R	F	G	Y	S	D	D	Q	I	Q	I	W	A	E	P	I	K	F	K	G	L	C	A	S	A	Q	V	E	A	M	N	Y	K	L	L	K	D	V	P	V	R	L	A	A	N	Y	I	I	K	S
Template Known Secondary structure																T	T	T	T	S								S		G	G	G															T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions