 |
Job Description | P32171 | Confidence | 78.79% | Date | Thu Jan 5 11:49:51 GMT 2012 |
Rank | 143 | Aligned Residues | 70 |
% Identity | 20% | Template | d2ap1a1 |
SCOP info | Ribonuclease H-like motif
| Actin-like ATPase domain
| ROK
|
Resolution | 1.90 |
|
 |
  |   |
366 | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | 420 | . | . | . | . | . | |
|
. | . | . | . | 430 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | A | R | C | I | F | D | S | L | A | L | L | Y | A | D | V | L | H | E | L | A | Q | L | R | G | E | D | F | S | Q | L | H | I | V | G | G | G | C | Q | N | T | L | L | N | Q | L | C | A | D | A | C | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | I | R | V | I | A | G | P | . |
. |
V | E | A | S | T | L | G | N | I |
Query Conservation |   |
  |
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |
|   |
|
|   |
|
|
|   | . | . | . | . | . | . | . | . | . |
|   |
|
|   |   |   |   | . | . |   |
|   |   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|   |   |   | . | . |
|   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|
Template Sequence |   |
E | Q | A | H | A | H | V | E | R | Y | L | D | L | L | A | V | C | L | G | N | I | L | T | I | . |
. |
V | D | P | D | L | L | V | I | G | G | G | L | S | N | F | T | A | I | T | T | Q | L | A | E | R | L | P | R | H | L | L | P | V | A | R | A | P | R | I | E | R | A | R | H | G | D | A | G | G | M | R | G | A | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
| S |  |  |  |  |  | S | G | G | G | G | S | T |  |  |  |  | S | S | G | G | G | S | G | G | G | S |
| T | T |
|
|
|
|  |  |  |  |
| S |
| T | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | |
|
. | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . |
  |
  |   |
435 | . | . |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
G | I | Q |
Query Conservation |   |
  |   |
|
Alig confidence |   |
|
|
|
Template Conservation |   |
  |   |
|
Template Sequence |   |
F | L | H |
Template Known Secondary structure |   |
 | T | T |
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
298 | . | 300 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|