Return to main results Retrieve Phyre Job Id

Job DescriptionP32171
Confidence100.00%DateThu Jan 5 11:49:51 GMT 2012
Rank20Aligned Residues234
% Identity18%Templated1r59o1
SCOP infoRibonuclease H-like motif Actin-like ATPase domain Glycerol kinase
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70 .........
Predicted Secondary structure 


























....
Query SS confidence 


































































. . . .








Query Sequence  RNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCEE. . . . GIRIDSIGI
Query Conservation 
  



 






 
 
  
                          
           
      ....   
 

 
Alig confidence 
































....





























....








Template Conservation   
 








 
  
 
  
  
        ....      
  
 
           
             
  
 
Template Sequence  NYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFP. . . . QYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGI
Template Known Secondary structure 
B

SSB
B


SSS
B





B

....



STT

B

GGGSSSTTTTTSTTTT

TTS
Template Predicted Secondary structure 









....











Template SS confidence 















































































   5....10.........20.........30....... ..40.........50.........60.........70.........80
 
   80.........90.. .......100.........110.........120.........130.........140.........150......
Predicted Secondary structure 








.






















..
Query SS confidence 












.































































. .
Query Sequence  DTWGVDFVLLDQQ. GQRVGLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAH. .
Query Conservation 
      
  
  .
 

 
 
 
 
 

      
            

          

 

    

       ..
Alig confidence 












.































































..
Template Conservation 
      
  
   
  
   
 
 
 
       
            

          

 

    
          
Template Sequence  TNQRETTVVWDKTTGQPIANAIVWQSRQSSPIADQLKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQEKADNGE
Template Known Secondary structure 


SS



B
SSS


SS

B
TT

SS
T
TTTT


SSTTSSSSSSSSSTTTTTT
Template Predicted Secondary structure 

































Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   157..160.........170 .........180.........190.........200.........210.........220.........230..
Predicted Secondary structure  ..


..




































Query SS confidence  . .













. .





























































Query Sequence  . . ALLMPDYFSYRLTG. . KMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVA
Query Conservation  ..     


   


..    
 
 

 
 
 
     
    
   

    

 
   
   
      
    

 
Alig confidence  ..













..


















































.....





Template Conservation         
 
   


      
 
 

 


 
     
    
   

    

 
       
   .....
 

  
Template Sequence  LLFGTIDSWLVWKLTDGQVHVTDYSNASRTMLYNIHKLEWDQEILDLLNIPSSMLPEVKSNSEVYGHTR. . . . . SVPIAG
Template Known Secondary structure 
B


TSSSS



TTSSSB
TTTSSB
TTTT

SSSS


SSS

B

S.....SS
Template Predicted Secondary structure 

































.....

Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220......... 230.....
 
   233......240.......
Predicted Secondary structure 





Query SS confidence 














Query Sequence  VASHDTASAVIASPL
Query Conservation   
  
  

  
 
 
Alig confidence  .













Template Conservation  .
  
  

  
 

Template Sequence  . MAGDQQAALFGQMA
Template Known Secondary structure  .

TTTSTT
Template Predicted Secondary structure  .





Template SS confidence 














   243......250......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions