Job Description P32171 Confidence 66.72% Date Thu Jan 5 11:49:51 GMT 2012 Rank 153 Aligned Residues 64 % Identity 13% Template c3psfA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(236-1259) Resolution 2.59 Å

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		6	.	.	.	10	.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		C	V	A	V	D	L	G	.	.	.	.	.	A	S	S	G	R	V	M	L	A	R	Y	E	R	E	C	R	S	L	T	L	R	E	I	H	R	F	N	N	G	L	H	S	Q	N	G	Y	V	T	W	D	V	D	S	L	E	S	A	I	R	L	G	L	N	K	V	C	E	E	G	I	R	I	D	S	I	G	I	D
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		I	L	S	L	T	C	G	Q	G	R	F	G	A	D	A	I	I	A	V	Y	V	N	R	K	G	D	F	I	R	D	Y	K	I	V	D	N	P	F	D	K	T	.	.	.	.	.	.	.	.	.	.	N	P	E	K	F	E	D	T	L	D	N	I	I	Q	S	C	Q	P	N	.	.	.	A	I	G	I	N	G	P
Template Known Secondary structure								T	T			T	T	T	S									T	T	S										S		T	T		S	S	.	.	.	.	.	.	.	.	.	.																			S	.	.	.							S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790											.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.				810	.	.	.	.	.	.
		81	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	P
Template Known Secondary structure		S	T
Template Predicted Secondary structure
Template SS confidence
		817	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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