Job Description P32171 Confidence 100.00% Date Thu Jan 5 11:49:51 GMT 2012 Rank 8 Aligned Residues 479 % Identity 15% Template c3jvpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribulokinase; PDBTitle: crystal structure of ribulokinase from bacillus halodurans Resolution 2.31 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.								.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.
Predicted Secondary structure																					.														.	.	.	.	.	.	.																																	.
Query SS confidence																					.														.	.	.	.	.	.	.																																	.
Query Sequence		R	N	C	V	A	V	D	L	G	A	S	S	G	R	V	M	L	A	R	.	Y	E	R	E	C	R	S	L	T	L	R	E	I	.	.	.	.	.	.	.	H	R	F	N	N	G	L	H	S	Q	N	G	Y	V	T	W	D	V	D	S	L	E	S	A	I	R	L	G	L	N	K	V	.	C	E	E	G	I	R	I
Query Conservation																					.														.	.	.	.	.	.	.																																	.
Alig confidence																					.														.	.	.	.	.	.	.																																	.
Template Conservation
Template Sequence		K	Y	T	I	G	V	D	Y	G	T	E	S	G	R	A	V	L	I	D	L	S	N	G	Q	E	L	A	D	H	V	T	P	Y	R	H	G	V	I	D	Q	Y	L	P	N	T	N	I	K	L	G	H	E	W	A	L	Q	H	P	L	D	Y	V	E	V	L	T	T	S	V	P	A	V	M	K	E	D	A	D	D	V
Template Known Secondary structure											S	S									T	T	T												T	T			B	S	S	B	S	T	T	S			B			T	T														T	T											S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100												.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		D	S	I	G	I	D	T	W	G	V	D	F	V	L	L	D	Q	Q	G	Q	R	V	G	L	P	V	.	.	.	.	.	.	.	.	.	.	.	A	Y	R	D	S	R	T	N	G	L	M	A	Q	A	Q	Q	Q	L	G	K	.	.	R	D	I	Y	Q	R	S	G	I	Q	F	L	P	F	N	T	L	Y	Q	L	R
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		I	G	I	G	V	D	F	T	A	C	T	M	L	P	V	D	E	E	G	Q	P	L	C	L	L	A	Q	Y	K	D	N	P	H	S	W	V	K	L	W	K	H	H	A	A	Q	D	K	A	N	A	I	N	E	M	A	E	K	R	G	E	A	F	L	P	R	Y	G	G	K	I	S	S	E	W	M	I	A	K	V	W
Template Known Secondary structure										S	S							T	T	S		B	G	G	G	S	S	S	T	T	S	S	G	G	G	S				T	T			T	T															T		T	T	G	G	G	G	T	T				S	S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		A	L	T	E	Q	Q	P	E	L	I	P	H	I	A	H	A	L	L	M	P	D	Y	F	S	Y	R	L	T	G	K	M	N	W	E	Y	T	N	A	T	T	T	Q	L	V	N	I	N	S	D	D	W	D	E	S	L	L	A	W	S	G	A	N	K	A	W	F	G	R	.	.	.	.	.	.	P	T	H	P	G	N
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.	.
Template Conservation
Template Sequence		Q	I	L	D	E	A	E	D	V	Y	N	R	T	D	Q	F	L	E	A	T	D	W	I	V	S	Q	M	T	G	K	I	V	K	N	S	C	T	A	G	Y	K	A	I	W	H	K	R	E	G	Y	P	S	N	E	F	F	K	A	L	D	P	R	L	E	H	L	T	T	T	K	L	R	G	D	I	V	P	L	G	E
Template Known Secondary structure															S															S	S												S			B	T	T	T	B	S								T	T		G	G	G	T	T	S	T	T	T	T	T		S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		V	I	G	H	W	I	C	P	Q	G	N	E	I	P	V	.	.	.	.	.	V	A	V	A	S	H	D	T	A	S	A	V	I	A	S	P	L	N	G	S	R	A	A	Y	L	S	S	G	T	W	S	L	M	G	F	E	S	Q	T	P	F	T	N	D	T	A	L	A	A	N	I	T	N	E	G	G	A	E	G	R
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.																																																.	.
Template Conservation																																																																					.	.
Template Sequence		R	A	G	G	L	L	P	E	M	A	E	K	M	G	L	N	P	G	I	A	V	A	V	G	N	V	D	A	H	A	A	V	P	A	V	G	V	T	T	P	G	K	L	V	M	A	M	G	T	S	I	C	H	M	L	L	G	E	K	E	Q	E	V	E	G	M	C	.	.	G	V	V	E	D	G	I	I	P	G	Y
Template Known Secondary structure															T	S		T	T									T	T	T	T					T	T			S	S								S	S	S								S	S					T	T		S	.	.					T	S	S	S	T	T	S
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.														.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	R	V	L	K	N	I	M	G	L	W	L	L	Q	R	V	L	Q	E	Q	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	L	P	A	L	I	S	A	T	Q	A	L	P	A	C	R	F	I	I	N	P	N	D	D	R	F	I	N	P	E	T	M	C	S	E	I	Q	A	A	C	R	E	T	A
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																																										.
Template Sequence		L	G	Y	E	A	G	Q	S	A	V	G	D	I	F	A	W	F	V	K	H	G	V	S	A	A	T	F	D	E	A	Q	E	K	G	V	N	V	H	A	L	L	E	E	K	A	S	Q	L	R	P	G	E	S	G	L	L	.	A	L	D	W	W	N	G	N	R	S	I	L	V	D	T	E	L	S	G	M	L	L	G
Template Known Secondary structure									S		S											T	S											T	T												T	S	S		T	T	S	S				.					T	T				T	T	T			S	S
Template Predicted Secondary structure																																																										.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.		.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure																																															.																						.
Query SS confidence																																															.																						.
Query Sequence		Q	P	I	P	E	S	D	A	E	L	A	R	C	I	F	D	S	L	A	L	L	Y	A	D	V	L	H	E	L	A	Q	L	R	G	E	D	F	S	Q	L	H	I	V	G	G	.	G	C	Q	N	T	L	L	N	Q	L	C	A	D	A	C	G	I	R	V	I	A	.	G	P	V	E	A	S	T	L	G	N	I	G
Query Conservation																																															.																						.
Alig confidence																																	.														.																						.
Template Conservation																																	.
Template Sequence		Y	T	L	Q	T	K	P	E	E	I	Y	R	A	L	L	E	A	T	A	F	G	T	R	A	I	V	D	A	F	H	G	.	R	G	V	E	V	H	E	L	Y	A	C	G	G	L	P	Q	K	N	H	L	L	M	Q	I	F	A	D	V	T	N	R	E	I	K	V	A	A	S	K	Q	T	P	A	L	G	A	A	M
Template Known Secondary structure				T	T																											T	.	T	T										S	S																	T	S					B			S	S
Template Predicted Secondary structure																																	.
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		436	.	.	.	440	.	.	.					.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		I	Q	L	M	T	L	D	E	.	.	.	.	L	N	N	V	D	D	F	R	Q	V	V	S	T	T	A	N	L	T	T	F	T	P	N	P	D	S	E	I	A	H	Y	V	A	Q	I	H	S	T	R	Q	T	K	E	L	C
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.																	.										.
Template Conservation																														.										.
Template Sequence		F	A	S	V	A	A	G	S	E	V	G	G	Y	D	S	I	E	E	A	A	K	K	M	G	R	V	K	D	.	E	T	F	K	P	I	P	E	H	.	V	A	I	Y	E	K	L	Y	Q	E	Y	V	T	L	H	D	Y	F
Template Known Secondary structure									S	S	S	S	S		S												B		S	.			B							.
Template Predicted Secondary structure																														.										.
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.		.	.	.	.	.	.	.	.	520		.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.