Job Description P32171 Confidence 100.00% Date Thu Jan 5 11:49:51 GMT 2012 Rank 6 Aligned Residues 477 % Identity 18% Template c3hz6A_ PDB info PDB header:transferase Chain: A: PDB Molecule:xylulokinase; PDBTitle: crystal structure of xylulokinase from chromobacterium violaceum Resolution 1.65 Å

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		2	.	.		.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.
Predicted Secondary structure					.																																																																			.	.	.
Query SS confidence					.																																																																			.	.	.
Query Sequence		T	F	R	.	N	C	V	A	V	D	L	G	A	S	S	G	R	V	M	L	A	R	Y	E	R	E	C	R	S	L	T	L	R	E	I	H	R	F	N	N	G	L	H	S	Q	N	G	Y	V	T	W	D	V	D	S	L	E	S	A	I	R	L	G	L	N	K	V	C	E	E	.	.	.	G	I	R	I	D	S	I
Query Conservation					.																																																																			.	.	.
Alig confidence					.																																					.	.	.	.																											.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		S	L	A	F	Y	I	A	T	F	D	I	G	T	T	E	V	K	A	A	L	A	D	R	D	G	G	L	H	F	Q	R	S	I	A	L	E	T	Y	G	D	.	.	.	.	G	N	G	P	V	E	Q	D	A	G	D	W	Y	D	A	V	Q	R	I	A	S	S	W	W	Q	S	G	V	D	A	R	R	V	S	A	I
Template Known Secondary structure														S	S									T	T	S													B	S	T	.	.	.	.	T	S	S																						T	T	T			G	G	G
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		G	I	D	T	W	G	V	D	F	V	L	L	D	Q	Q	G	Q	R	V	G	L	P	V	A	Y	R	D	S	R	T	N	G	L	M	A	Q	A	Q	Q	Q	L	G	K	R	D	I	Y	Q	R	S	G	I	Q	F	L	P	F	N	T	L	Y	Q	L	R	A	L	T	E	Q	Q	P	E	L	I	P	H	I	A	H	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		V	L	S	G	Q	X	Q	N	F	L	P	L	D	Q	D	H	E	P	L	H	R	A	V	L	Y	S	D	K	R	P	L	K	E	A	E	E	I	N	A	R	H	G	A	D	N	L	W	S	A	L	E	N	P	X	T	A	A	S	I	L	P	K	L	V	F	W	R	A	S	F	P	Q	A	F	G	R	L	R	H	V
Template Known Secondary structure								S		B					T	T	S		B	S	S					T	T																									S	S			S	T	T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.
Predicted Secondary structure																																																																												.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.
Query Sequence		A	L	L	M	P	D	Y	F	S	Y	R	L	T	G	K	M	N	W	E	Y	T	N	A	T	T	T	Q	L	V	N	I	N	S	D	D	W	D	E	S	L	L	A	W	S	G	A	N	K	A	W	F	G	R	P	T	H	P	G	N	V	I	G	H	W	I	C	P	Q	G	N	E	I	P	V	.	.	.	.	.	V
Query Conservation																																																																												.	.	.	.	.
Alig confidence																																																																												.	.	.	.	.
Template Conservation
Template Sequence		V	L	G	A	K	D	Y	V	V	L	R	L	T	G	R	H	A	T	D	R	T	N	A	S	T	T	G	L	Y	R	P	K	D	D	A	W	H	V	E	L	L	A	D	Y	G	F	S	L	D	L	X	P	R	L	L	E	P	G	E	Q	V	G	G	V	S	A	L	A	A	R	Q	T	G	F	V	S	G	T	P	V
Template Known Secondary structure				S											S												T	T				T	T	T	T										T	T			G	G	G	S						T	T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	S	H	D	T	A	S	A	V	I	A	S	P	L	N	G	S	R	A	A	Y	L	S	S	G	T	W	S	L	M	G	F	E	S	Q	T	P	F	T	N	D	T	A	L	A	A	N	I	T	N	E	G	G	A	E	G	R	Y	R	V	L	K	N	I	M	G	L	W	L	L	Q	R	V	L	Q	E	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	C	G	L	G	D	A	G	A	A	T	L	G	V	G	V	L	D	D	E	D	A	Y	L	H	L	G	T	T	G	W	L	A	R	L	T	Q	T	D	P	V	G	D	X	P	V	G	T	I	F	R	L	A	G	I	I	A	G	K	T	L	Q	V	A	P	V	L	N	A	G	N	I	L	Q	W	A	L	T	L	V
Template Known Secondary structure															T	T			S	T	T							S	S	S														S			S	S							S	S	S	T	T									S	S	S								G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		312	.	.								.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.
Query Sequence		I	N	D	.	.	.	.	.	.	.	L	P	A	L	I	S	A	T	Q	A	L	P	A	C	R	F	I	I	N	P	N	D	D	R	F	I	N	P	E	T	M	C	S	E	I	Q	A	A	C	R	E	T	A	Q	P	I	P	E	S	D	A	E	L	A	R	C	I	F	D	S	L	A	L	L	Y	A	D	V	L	H
Query Conservation					.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.																				.
Template Conservation																															.
Template Sequence		G	H	R	P	G	E	D	C	A	E	Y	F	H	X	A	A	A	E	V	Q	G	V	T	V	P	D	G	L	L	.	F	V	P	Y	L	H	A	E	R	C	P	V	E	L	P	A	P	R	G	A	L	L	G	V	T	G	A	T	T	R	A	Q	I	L	L	A	V	L	E	G	A	A	L	S	L	R	W	C	A	E
Template Known Secondary structure		T			T	T	S		S												T	T					T	T			.					S	S		B		S	S	S		B	S	S										T	T
Template Predicted Secondary structure																															.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		E	L	A	Q	L	R	G	E	D	F	S	Q	L	H	I	V	G	G	G	C	Q	N	T	L	L	N	Q	L	C	A	D	A	C	G	I	R	V	I	A	.	.	G	P	V	E	A	S	T	L	G	N	I	G	I	Q	L	M	T	L	D	E	L	N	N	V	D	D	F	R	Q	V	V	S	T	T	A	N	L	T	T
Query Conservation																																									.	.
Alig confidence							.	.	.																																.	.																																				.	.
Template Conservation							.	.	.																																																																					.	.
Template Sequence		L	L	G	X	E	.	.	.	K	V	G	L	L	K	V	V	G	G	G	A	R	S	E	A	W	L	R	X	I	A	D	N	L	N	V	S	L	L	V	K	P	D	A	H	L	H	P	L	R	G	L	A	A	L	A	A	V	E	L	E	W	S	H	S	I	Q	D	F	L	R	E	A	D	L	R	S	.	.	N	I
Template Known Secondary structure				T	G	G	.	.	.	G								S	G	G	G	G													T									G	G	G														T	T	S		S											T			.	.
Template Predicted Secondary structure							.	.	.																																																																					.	.
Template SS confidence
		395	.	.	.	.				400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.			.	.
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	P	N	P	D	S	E	I	A	H	Y	V	A	Q	I	H	S	T	R	Q	T	K	E	L	C	A
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		L	H	P	Q	P	C	D	E	.	G	R	R	R	R	K	F	E	R	F	K	Q	C	V	E	T	L	G
Template Known Secondary structure		B								.																		T
Template Predicted Secondary structure										.
Template SS confidence
		473	.	.	.	.	.	.	480		.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.