Return to main results Retrieve Phyre Job Id

Job DescriptionP32171
Confidence100.00%DateThu Jan 5 11:49:51 GMT 2012
Rank3Aligned Residues475
% Identity16%Templatec3flcX_
PDB info PDB header:transferaseChain: X: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of the his-tagged h232r mutant of glycerol kinase2 from enterococcus casseliflavus with glycerol
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60........ .70.......
Predicted Secondary structure 


























....

Query SS confidence 


































































. . . .








Query Sequence  TFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVC. . . . EEGIRIDSI
Query Conservation   

  



 






 
 
  
                          
           
    ....     
 

Alig confidence 


































....



























....








Template Conservation     
 








 

 
 
  
  
        ....      
  
 
    
      
             
 

Template Sequence  EKNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFP. . . . QYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGI
Template Known Secondary structure 



SSTTS


....
B
SSTT





GGG
Template Predicted Secondary structure 











....









Template SS confidence 















































































   3......10.........20.........30....... ..40.........50.........60.........70........
 
   78.80.........90. ........100.........110.........120.........130.........140.........150......
Predicted Secondary structure 







.























Query SS confidence 













.
































































Query Sequence  GIDTWGVDFVLLDQ. QGQRVGLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAH
Query Conservation   

      
  
 . 
 

 
 
 
 
 

      
            

          

 

    

       
Alig confidence 













.
































































Template Conservation   

      
  
   
  
   
 
 
 

      
            

          

 

    
        
Template Sequence  GITNQRETTVVWDKTTGQPIANAIVWQSRQSSPIADQLKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQEKADN
Template Known Secondary structure 
SS
TTT

BSS

TT

TTTT
S



TTSSTTT
Template Predicted Secondary structure 

































Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150........
 
   157..160.........170. ........180.........190.........200.........210.........220.........230
Predicted Secondary structure  ....



..



































Query SS confidence  . . . .














. .


























































Query Sequence  . . . . ALLMPDYFSYRLTGK. . MNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPV
Query Conservation  ....     


   


 ..   
 
 

 
 
 
     
    
   

    

 
   
   
      
    
Alig confidence  ....














..


























































Template Conservation           


   


      
 
 

 
 
 
     
  
 
   

    

 
       
 
        
 
Template Sequence  GELLFGTIDSWLVWKLTDGQVHVTDYSNASRTMLYNIHKLEWDQEILDLLNIPSSMLPEVKSNSEVYGHTRSYRFYGSEV
Template Known Secondary structure  T
TTTS

TTTSTTTT
TT

GGG


S

GGGGTT


Template Predicted Secondary structure 
















































Template SS confidence 















































































   159160.........170.........180.........190.........200.........210.........220.........230........
 
   231........240.........250.........260.........270.........280.........290.........300.........
Predicted Secondary structure  .



































Query SS confidence  .














































































Query Sequence  . VAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGLWLLQRVLQE
Query Conservation  .
  
  
  

  
 
           


         
                                       
Alig confidence  .














































































Template Conservation 

  
  
  

  
 
    
      


                                        
    
   
Template Sequence  PIAGMAGDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTGEEPLSDNDLLTTIGYGINGKVYYALEGSIFVAGSAIQWLRD
Template Known Secondary structure  TT

STT
SSST




TTSTTS
S
Template Predicted Secondary structure 



























Template SS confidence 















































































   239240.........250.........260.........270.........280.........290.........300.........310........
 
   310... ......320.........330.........340.........350.........360.........370.........380........
Predicted Secondary structure 



.





























Query SS confidence 



.










































































Query Sequence  QQIN. DLPALISATQALPACRFIINPNDDRFINPETMCSEIQAACRETAQPIPESDAELARCIFDSLALLYADVLHELAQ
Query Conservation      .    
   
                                  

    
   
 







         
  
Alig confidence 



.



















.





















































Template Conservation                         
 .  
   


 
       
   

        
 


 



         
  
Template Sequence  GLRMIETSPQSEELAAKAKGDNEVY. VVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFVRATLQAVAYQSKDVIDTMKK
Template Known Secondary structure  TS

SSSTT

S
S

.

TT
B
TTT
BTT





TT

Template Predicted Secondary structure 













.






















Template SS confidence 















































































   320.........330.........340.... .....350.........360.........370.........380.........390........
 
   389390.........400.........410.........420... ......430.........440.........450.........460.......
Predicted Secondary structure 













.

















Query SS confidence 


































.











































Query Sequence  LRGEDFSQLHIVGGGCQNTLLNQLCADACGIRVIA. GPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNP
Query Conservation    
     
   

 
 
  
 

 


 
 

  .   
  
 


  
    
                      
  
Alig confidence 


































.































...








Template Conservation    
     
   

 
 
    

 


 
 

      
  
 


  
    
             ...      
  
Template Sequence  DSGIDIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKSMAE. . . EGQMFTPEM
Template Known Secondary structure 




SGGGG
TSSSS
TTSS

T

...


S
Template Predicted Secondary structure 

























...




Template SS confidence 















































































   399400.........410.........420.........430.........440.........450.........460...... ...470.....
 
   468.470.........480......
Predicted Secondary structure 
Query SS confidence 


















Query Sequence  DSEIAHYVAQIHSTRQTKE
Query Conservation        
   
  
   

Alig confidence 



..












Template Conservation      ..    
        
Template Sequence  PAEE. . RDNLYEGWKQAVA
Template Known Secondary structure 
..
Template Predicted Secondary structure 
..
Template SS confidence 


















   476... 480.........490..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions