Return to main results Retrieve Phyre Job Id

Job DescriptionP32171
Confidence100.00%DateThu Jan 5 11:49:51 GMT 2012
Rank14Aligned Residues463
% Identity17%Templatec3ezwD_
PDB info PDB header:transferaseChain: D: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of a hyperactive escherichia coli glycerol kinase2 mutant gly230 --> asp obtained using microfluidic crystallization3 devices
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60......... 70.......
Predicted Secondary structure 



























....
Query SS confidence 



































































. . . .







Query Sequence  TFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCE. . . . EGIRIDSI
Query Conservation   

  



 






 
 
  
                          
           
     ....    
 

Alig confidence 


































....




























....







Template Conservation     





 



 
  
 
  
  
        ....      
  
 
           
             
 

Template Sequence  EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFE. . . . QIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAI
Template Known Secondary structure 



SSTT



....
B

STT


TT

GGG
Template Predicted Secondary structure 












....











Template SS confidence 















































































   2.......10.........20.........30...... ...40.........50.........60.........70.......
 
   78.80.........90. ........100.........110.........120.........130.........140.........150......
Predicted Secondary structure 







.























Query SS confidence 













.
































































Query Sequence  GIDTWGVDFVLLDQ. QGQRVGLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAH
Query Conservation   

      
  
 . 
 

 
 
 
 
 

      
            

          

 

    

       
Alig confidence 













.
































































Template Conservation   

      
 

   
 

   
 
 
 
       
            

          

 

    

       
Template Sequence  GITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARR
Template Known Secondary structure 
SS
BTTT

BSS

TT

TTTT
S

SSTTSSTTT
Template Predicted Secondary structure 































Template SS confidence 















































































   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   157..160.........170 .........180.........190.........200.........210.........220.........230
Predicted Secondary structure  ....


..




































Query SS confidence  . . . .













. .



























































Query Sequence  . . . . ALLMPDYFSYRLTG. . KMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPV
Query Conservation  ....     


   


..    
 
 

 
 
 
     
    
   

    

 
   
   
      
    
Alig confidence  ....













..


















































.....



Template Conservation            

   


     

 
 

 
 
 
     
   

   

    

 
       
   .....  

Template Sequence  GELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTN. . . . . RIPI
Template Known Secondary structure  TS
TTTS

GGGSSTTTT
TT

GGG


S
.....
Template Predicted Secondary structure 



































.....

Template SS confidence 















































































   158.160.........170.........180.........190.........200.........210.........220........ .230..
 
   231........240.........250.........260.........270.........280..... ....290.........300.........
Predicted Secondary structure 































.



Query SS confidence 






















































.























Query Sequence  VAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEG. GAEGRYRVLKNIMGLWLLQRVLQE
Query Conservation 
  
  
  

  
 
           


         
               .                        
Alig confidence 

.



















































.























Template Conservation    .
  
  

  
 
    
    
 


                                         
  
 
   
Template Sequence  SG. IAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRD
Template Known Secondary structure  .TT

STT
SSS
TTS



SSS

TTS
S
S
Template Predicted Secondary structure  .






























Template SS confidence 















































































   240. ........250.........260.........270.........280.........290.........300.........310........
 
   310.........320.........330.........340.........350.........360.........370.........380.........
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  QQINDLPALISATQALPACRFIINPNDDRFINPETMCSEIQAACRETAQPIPESDAELARCIFDSLALLYADVLHELAQL
Query Conservation          
   
                                  

    
   
 







         
   
Alig confidence 














.









...


















































Template Conservation                 .   
    
 ...  
 
 
     
 
   

        
 







         
   
Template Sequence  EMKLIDSEYFATKVQ. NTNGVYVVPA. . . FTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQAD
Template Known Secondary structure  TS



TSS.S
TT


...TT
B
TTT
BTT





TT

Template Predicted Secondary structure 







.





...




















Template SS confidence 















































































   319320.........330... ......340... ......350.........360.........370.........380.........390....
 
   390.........400.........410.........420.........430.........440.........450.........460.........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  RGEDFSQLHIVGGGCQNTLLNQLCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDS
Query Conservation   
     
   

 
 
  
 

 


 
 

     
  
 


  
    
                      
    
Alig confidence 

































..


























......










Template Conservation   
     
 
 



 
    

 


 
 

  .. 
  
 


  
    
          ......      
    
Template Sequence  SGIRLHALRVDGGAVANNFLMQFQSDILGTRVER. . PEVTALGAAYLAGLAVGFWQNLDELQE. . . . . . IEREFRPGIET
Template Known Secondary structure 



SSGGGG
TS..

TSSS
T
......




S
Template Predicted Secondary structure 













..








......






Template SS confidence 















































































   399400.........410.........420.........430.. .......440.........450......... 460.........470
 
   470.........480........
Predicted Secondary structure 
Query SS confidence 


















Query Sequence  EIAHYVAQIHSTRQTKELC
Query Conservation      
   
  
   

  
Alig confidence 

..














Template Conservation    ..             
 
Template Sequence  TE. . RNYRYAGWKKAVKRA
Template Known Secondary structure  ..
Template Predicted Secondary structure  ..
Template SS confidence 


















   477. .480.........490...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions