 |
Job Description | P32171 | Confidence | 97.25% | Date | Thu Jan 5 11:49:51 GMT 2012 |
Rank | 65 | Aligned Residues | 61 |
% Identity | 15% | Template | c2gupA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:rok family protein; |
PDBTitle: structural genomics, the crystal structure of a rok family protein2 from streptococcus pneumoniae tigr4 in complex with sucrose
|
Resolution | 2.01 Å |
|
 |
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | N | C | V | A | V | D | L | G | A | S | S | G | R | V | M | L | A | R | Y | E | R | E | C | R | S | L | T | L | R | E | I | H | R | F | N | N | G | L | H | S | Q | N | G | Y | V | T | W | D | V | D | S | L | E | S | A | I | R | L | G | L | N | K | V | C | E | E | G | I | R | I | D | S | I | G | I | D | T | W | G |
Query Conservation |   |
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   | . | . | . | . | . |   |   |
|   |   |
|
|
|
|   |   |
|
Template Sequence |   |
X | T | I | A | T | I | D | I | G | G | T | G | I | K | F | A | S | L | T | P | D | G | K | I | L | D | K | T | S | I | S | T | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | N | L | E | D | L | L | A | W | L | D | Q | R | L | S | E | . |
. |
. |
. |
. |
Q | D | Y | S | G | I | A | X | S | V | P | G |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | S |
|
| S |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|