Job Description P32171 Confidence 100.00% Date Thu Jan 5 11:49:51 GMT 2012 Rank 1 Aligned Residues 478 % Identity 98% Template c2cgkB_ PDB info PDB header:transferase Chain: B: PDB Molecule:l-rhamnulose kinase; PDBTitle: crystal structure of l-rhamnulose kinase from escherichia2 coli in an open uncomplexed conformation. Resolution 2.46 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	R	N	C	V	A	V	D	L	G	A	S	S	G	R	V	M	L	A	R	Y	E	R	E	C	R	S	L	T	L	R	E	I	H	R	F	N	N	G	L	H	S	Q	N	G	Y	V	T	W	D	V	D	S	L	E	S	A	I	R	L	G	L	N	K	V	C	E	E	G	I	R	I	D	S	I	G	I	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	R	N	C	V	A	V	D	L	G	A	S	S	G	R	V	M	L	A	R	Y	E	R	E	C	R	S	L	T	L	R	E	I	H	R	F	N	N	G	L	H	S	Q	N	G	Y	V	T	W	D	V	D	S	L	E	S	A	I	R	L	G	L	N	K	V	C	A	A	G	I	A	I	D	S	I	G	I	D	T
Template Known Secondary structure													S	S											T	T	T	T																	S	S	S																							T	T										B
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	G	V	D	F	V	L	L	D	Q	Q	G	Q	R	V	G	L	P	V	A	Y	R	D	S	R	T	N	G	L	M	A	Q	A	Q	Q	Q	L	G	K	R	D	I	Y	Q	R	S	G	I	Q	F	L	P	F	N	T	L	Y	Q	L	R	A	L	T	E	Q	Q	P	E	L	I	P	H	I	A	H	A	L	L	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	G	V	D	F	V	L	L	D	Q	Q	G	Q	R	V	G	L	P	V	A	Y	R	D	S	R	T	N	G	L	M	A	Q	A	Q	Q	Q	L	G	K	R	D	I	Y	Q	R	S	G	I	Q	F	L	P	F	N	T	L	Y	Q	L	R	A	L	T	E	Q	Q	P	E	L	I	P	H	I	A	H	A	L	L	M	P
Template Known Secondary structure			S	S							T	T	S		B		S			B		T	T		S	T	T	T	T									T	T														T	T														T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	F	S	Y	R	L	T	G	K	M	N	W	E	Y	T	N	A	T	T	T	Q	L	V	N	I	N	S	D	D	W	D	E	S	L	L	A	W	S	G	A	N	K	A	W	F	G	R	P	T	H	P	G	N	V	I	G	H	W	I	C	P	Q	G	N	E	I	P	V	V	A	V	A	S	H	D	T	A	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	F	S	Y	R	L	T	G	K	M	N	W	E	Y	T	N	A	T	T	T	Q	L	V	N	I	N	S	D	D	W	D	E	S	L	L	A	W	S	G	A	N	K	A	W	F	G	R	P	T	H	P	G	N	V	I	G	H	W	I	C	P	Q	G	N	E	I	P	V	V	A	V	A	S	H	D	T	A	S	A
Template Known Secondary structure										S					B						T	T	T		B		T	T	T	S	S	B									T			G	G	G					B		T	T									S	S	S											B
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	A	S	P	L	N	G	S	R	A	A	Y	L	S	S	G	T	W	S	L	M	G	F	E	S	Q	T	P	F	T	N	D	T	A	L	A	A	N	I	T	N	E	G	G	A	E	G	R	Y	R	V	L	K	N	I	M	G	L	W	L	L	Q	R	V	L	Q	E	Q	Q	I	N	D	L	P	A	L	I	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	A	S	P	L	N	G	S	R	A	A	Y	L	S	S	G	T	W	S	L	M	G	F	E	S	Q	T	P	F	T	N	D	T	A	L	A	A	N	I	T	N	E	G	G	A	E	G	R	Y	R	V	L	K	N	I	M	G	L	W	L	L	Q	R	V	L	Q	E	R	Q	I	N	D	L	P	A	L	I	A	A
Template Known Secondary structure				T	S				S	S	S							S	S	S								S	S				S						T	T							G	G	G											T										T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	A	L	P	A	C	R	F	I	I	N	P	N	D	D	R	F	I	N	P	E	T	M	C	S	E	I	Q	A	A	C	R	E	T	A	Q	P	I	P	E	S	D	A	E	L	A	R	C	I	F	D	S	L	A	L	L	Y	A	D	V	L	H	E	L	A	Q	L	R	G	E	D	F	S	Q	L	H	I	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	A	L	P	A	C	R	F	I	I	N	P	N	D	D	R	F	I	N	P	D	E	M	C	S	E	I	Q	A	A	C	R	E	M	A	Q	P	I	P	E	S	D	A	E	L	A	R	C	I	F	D	S	L	A	L	L	Y	A	D	V	L	H	E	L	A	Q	L	R	G	E	D	F	S	Q	L	H	I	V	G
Template Known Secondary structure			T	T	S		S	S	S	S				T	T	S	G	G	G	T	S		S													T	T						S																												T	S			S						S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	C	Q	N	T	L	L	N	Q	L	C	A	D	A	C	G	I	R	V	I	A	G	P	V	E	A	S	T	L	G	N	I	G	I	Q	L	M	T	L	D	E	L	N	N	V	D	D	F	R	Q	V	V	S	T	T	A	N	L	T	T	F	T	P	N	P	D	S	E	I	A	H	Y	V	A	Q	I	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	C	Q	N	T	L	L	N	Q	L	C	A	D	A	C	G	I	R	V	I	A	G	P	V	E	A	S	T	L	G	N	I	G	I	Q	L	M	T	L	D	E	L	N	N	V	D	D	F	R	Q	V	V	S	T	T	A	N	L	T	T	F	T	P	N	P	D	S	E	I	A	H	Y	V	A	L	I	H
Template Known Secondary structure		G	G	G	G													T	S							S	S														T	T	S		S	S												S									T	T	S									T
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.