Job Description P14377 Confidence 99.57% Date Thu Jan 5 11:34:02 GMT 2012 Rank 28 Aligned Residues 108 % Identity 21% Template c2zbkB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of an intact type ii dna topoisomerase:2 insights into dna transfer mechanisms Resolution 3.56 Å

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		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.						.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.							.	420		.	.
Predicted Secondary structure																					.	.	.	.	.											.																																			.	.	.	.	.	.			.
Query SS confidence																					.	.	.	.	.											.																																			.	.	.	.	.	.			.
Query Sequence		R	L	T	Q	V	L	L	N	L	Y	L	N	A	I	Q	A	I	G	Q	.	.	.	.	.	H	G	V	I	S	V	T	A	S	E	.	S	G	A	G	V	K	I	S	V	T	D	S	G	K	G	I	A	A	D	Q	L	D	A	I	F	T	P	Y	F	T	T	K	A	E	.	.	.	.	.	.	G	T	.	G	L
Query Conservation																					.	.	.	.	.											.																																			.	.	.	.	.	.			.
Alig confidence																					.	.	.	.	.											.																																			.	.	.	.	.	.			.
Template Conservation
Template Sequence		A	L	Y	Q	T	V	R	E	L	I	E	N	S	L	D	A	T	D	V	H	G	I	L	P	N	I	K	I	T	I	D	L	I	D	D	A	R	Q	I	Y	K	V	N	V	V	D	N	G	I	G	I	P	P	Q	E	V	P	N	A	F	G	R	V	L	Y	S	S	K	Y	V	N	R	Q	T	R	G	M	Y	G	L
Template Known Secondary structure																T	T	T	T	T	T	T														T	T	T	T										S					G	G	G	S					T	S				S						S			S		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.		.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																	.								.
Query SS confidence																	.								.
Query Sequence		G	L	A	V	V	H	N	I	V	E	Q	H	G	G	T	.	I	Q	V	A	S	Q	E	.	G	K	G	S	T	F	T	L	W	L	P	V	N	I	T	R	K	D	P
Query Conservation																	.								.
Alig confidence																	.								.
Template Conservation
Template Sequence		G	V	K	A	A	V	L	Y	S	Q	M	H	Q	D	K	P	I	E	I	E	T	S	P	V	N	S	K	R	I	Y	T	F	K	L	K	I	D	I	N	K	N	E	P
Template Known Secondary structure																									T	T		S											T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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