Job Description P14377 Confidence 26.11% Date Thu Jan 5 11:34:02 GMT 2012 Rank 142 Aligned Residues 87 % Identity 21% Template c2yv4A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:hypothetical protein ph0435; PDBTitle: crystal structure of c-terminal sua5 domain from pyrococcus horikoshii2 hypothetical sua5 protein ph0435 Resolution 2.00 Å

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		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		A	N	D	T	L	P	E	I	Q	A	D	P	D	R	L	T	Q	V	L	L	N	L	Y	L	N	A	I	Q	A	I	G	Q	H	G	V	I	S	V	T	A	S	E	S	G	A	G	V	K	I	S	V	T	D	S	G	K	G	I	A	A	D	Q	L	D	A	I	F	T	P	Y	F	T	T	K	A	E	G	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																														.	.	.																								.	.	.																					.	.	.
Template Conservation																														.	.	.																								.	.	.
Template Sequence		P	N	A	E	V	I	V	V	E	G	P	R	E	K	V	K	G	K	I	T	E	L	V	K	E	L	K	E	.	.	.	R	G	K	K	V	G	V	I	G	S	E	S	Y	N	A	D	E	F	F	F	L	G	S	.	.	.	S	V	E	E	V	A	K	N	L	F	K	A	L	R	Y	X	D	K	A	G	V	D	V
Template Known Secondary structure			S	S																										.	.	.	T	T								S	S		T	T		S							S	.	.	.	S																		T	T		S
Template Predicted Secondary structure																														.	.	.																								.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
										420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	T	G	L	G	L	A	V	V	H	N	I	V	E	Q	H	G	G	T	I
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.												.	.	.
Template Conservation																					.	.	.
Template Sequence		V	I	A	E	G	V	E	E	R	G	L	G	L	A	V	X	N	R	L	.	.	.	S	G	Y	K	I
Template Known Secondary structure								S	G	G	G										.	.	.
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.				330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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