Job Description P14377 Confidence 99.52% Date Thu Jan 5 11:34:02 GMT 2012 Rank 29 Aligned Residues 112 % Identity 21% Template c2q2eB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei Resolution 4.00 Å

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		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.				.	.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.						.	.	420	.	.	.
Predicted Secondary structure																										.	.	.											.																																.	.	.	.	.
Query SS confidence																										.	.	.											.																																.	.	.	.	.
Query Sequence		D	P	D	R	L	T	Q	V	L	L	N	L	Y	L	N	A	I	Q	A	I	G	Q	H	G	.	.	.	V	I	S	V	T	A	S	E	S	G	.	A	G	V	K	I	S	V	T	D	S	G	K	G	I	A	A	D	Q	L	D	A	I	F	T	P	Y	F	T	T	K	A	.	.	.	.	.	E	G	T	G	L	G
Query Conservation																										.	.	.											.																																.	.	.	.	.
Alig confidence																										.	.	.											.																																.	.	.	.	.
Template Conservation
Template Sequence		A	P	R	S	L	I	T	T	V	K	E	A	V	D	N	A	L	D	A	C	E	E	A	G	I	L	P	D	I	L	V	Q	V	E	R	T	G	P	D	Y	V	T	V	I	I	E	D	N	G	P	G	I	V	R	E	Q	I	P	K	V	F	A	K	L	L	Y	G	F	H	A	L	K	S	R	G	Q	Q	G	I	G
Template Known Secondary structure																						T	T	T	S		S											T	T	T										S					G	G	G						S													S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.		.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure																.							.
Query SS confidence																.							.
Query Sequence		L	A	V	V	H	N	I	V	E	Q	H	G	G	T	.	I	Q	V	A	S	Q	.	E	G	K	G	S	T	F	T	L	W	L	P	V	N	I	T	R	K	D	P	Q
Query Conservation																.							.
Alig confidence																.							.
Template Conservation
Template Sequence		I	S	A	A	V	L	Y	A	Q	M	T	A	G	R	H	T	K	I	L	S	K	T	S	P	T	A	P	A	H	Y	Y	E	L	M	I	N	T	S	T	N	E	P	D
Template Known Secondary structure													T											S	S	S	S											S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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