Job Description P14377 Confidence 97.71% Date Thu Jan 5 11:34:02 GMT 2012 Rank 52 Aligned Residues 72 % Identity 21% Template c1qzrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase ii; PDBTitle: crystal structure of the atpase region of saccharomyces cerevisiae2 topoisomerase ii bound to icrf-187 (dexrazoxane) Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.				.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.									.	.	.	.	.	.	410	.	.	.											.	.
Predicted Secondary structure																					.	.	.																													.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.																													.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	Q	V	L	L	N	L	Y	L	N	A	I	Q	A	I	G	Q	H	.	.	.	G	V	I	S	V	T	A	S	E	S	G	A	G	V	K	I	S	V	T	D	S	G	K	G	I	A	A	D	.	.	.	.	.	.	.	.	Q	L	D	A	I	F	T	P	Y	F	.	.	.	.	.	.	.	.	.	.	T	T
Query Conservation																					.	.	.																													.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.													.	.															.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.
Template Sequence		L	F	K	I	F	D	E	I	L	V	N	A	A	D	N	K	V	R	D	P	S	M	K	R	I	D	V	N	I	H	A	E	E	H	.	.	T	I	E	V	K	N	D	G	K	G	I	P	I	E	I	H	N	K	E	N	I	Y	I	P	E	M	I	F	G	H	L	L	T	S	S	N	Y	D	D	D	E	K	K	V
Template Known Secondary structure																					T	T										T	T	T	T	.	.								S	S					S	B		T	T	T		S	B								S	S	S			S				T	T	S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	E	G	T	G	L	G	L	A	V	V	H	N	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	G	R	N	G	Y	G	A	K	L	C	N	I	F
Template Known Secondary structure			S			S	S									T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions